Gene YPK_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0458 
Symbol 
ID6090200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp498765 
End bp500114 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content49% 
IMG OID641595520 
Productacetyl-CoA carboxylase biotin carboxylase subunit 
Protein accessionYP_001719214 
Protein GI170022709 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA AAATCGTAAT CGCTAACCGC GGTGAGATTG CGCTGCGGAT CCTACGGGCT 
TGTAAGGAGC TGGGGATCAA GACTGTCGCC GTTCACTCTG TTGCGGATCG TGACCTGAAA
CACGTATTAC TGGCTGACGA GACTGTTTGT ATCGGTCCTG CGCCTTCAGT TAAAAGCTAT
CTGAACATCC CGGCAATCAT TTCGGCTGCT GAGATCACCG GCGCAGTGGC TGTTCACCCC
GGCTATGGTT TCCTGTCTGA AAATGCTGAT TTTGCCGAAC AGGTAGAGCG TTCCGGTTTC
ATTTTCATTG GCCCACGAGC CGAAACCATT CGCCTGATGG GCGATAAAGT TTCCGCTATT
AGCGCAATGA AAAAAGCCGG TGTGCCATGC GTACCCGGTT CTGATGGCCC ATTAAGCGAC
GATACCACCA AGAACAAAGC CTTTGCCAAA CGTATCGGTT ATCCGGTCAT TATCAAGGCA
TCTGGCGGCG GCGGTGGCCG TGGTATGCGT GTGGTTCGTC ACGACAAAGA TCTGGAAGAA
TCCATTAACA TGACCCGTGC GGAAGCGAAA GCTGCTTTCA ATAACGACAT GGTTTATATG
GAGAAATACC TTGAGAACCC GCGCCATATC GAGGTTCAGA TTTTGGCTGA TGGTCAGGGT
AATGCTATCT ATCTGGCCGA ACGCGATTGC TCTATGCAGC GCCGCCACCA GAAAGTGGTT
GAAGAAGCAC CTGCACCAGG TATCACCAGC GAAATGCGCC GTTATATCGG TGAGCGCTGC
GCGAAAGCCT GTATGGAAAT CGGTTATCGC GGTGCAGGTA CCTTTGAGTT CTTGTATGAA
AACGGTGAGT TCTATTTCAT TGAAATGAAC ACCCGTATTC AAGTTGAACA CACGGTTACC
GAAATGATCA CCGGTATTGA TTTGATCAAA GAGCAGCTCC GTATCGCGGC TGGCCAACCT
CTCTCCATCA AACAAGATGA AGTGAAAGTG CATGGCCACG CTGTTGAATG CCGTATTAAC
GCCGAAGATC CAAATACCTT CCTGCCAAGT CCGGGTAAAA TTACCCGCTT CCATGCACCG
GGCGGTTTCG GTGTTCGTTG GGAATCTCAT ATTTACGCAG GCTATACTGT GCCTCCGTAT
TATGATTCCA TGATTGGTAA GCTGATCACT TACGGTGAAA ACCGTGACGT GGCGATTGCT
CGTATGAAAA ATGCCTTGGC AGAGCTCATT ATCGATGGCA TCAAAACCAA CGTTGAGTTA
CAGCAACGCA TTATGAATGA CGAAAACTTC CAGCACGGTG GGACTAATAT CCACTATCTG
GAGAAAAAAC TCGGGTTGCA AGAAACCTGA
 
Protein sequence
MLDKIVIANR GEIALRILRA CKELGIKTVA VHSVADRDLK HVLLADETVC IGPAPSVKSY 
LNIPAIISAA EITGAVAVHP GYGFLSENAD FAEQVERSGF IFIGPRAETI RLMGDKVSAI
SAMKKAGVPC VPGSDGPLSD DTTKNKAFAK RIGYPVIIKA SGGGGGRGMR VVRHDKDLEE
SINMTRAEAK AAFNNDMVYM EKYLENPRHI EVQILADGQG NAIYLAERDC SMQRRHQKVV
EEAPAPGITS EMRRYIGERC AKACMEIGYR GAGTFEFLYE NGEFYFIEMN TRIQVEHTVT
EMITGIDLIK EQLRIAAGQP LSIKQDEVKV HGHAVECRIN AEDPNTFLPS PGKITRFHAP
GGFGVRWESH IYAGYTVPPY YDSMIGKLIT YGENRDVAIA RMKNALAELI IDGIKTNVEL
QQRIMNDENF QHGGTNIHYL EKKLGLQET