| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0453 |
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| Symbol | |
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| ID | 6090482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 493086 |
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| End bp | 494051 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595515 |
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| Product | tRNA-dihydrouridine synthase B |
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| Protein accession | YP_001719209 |
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| Protein GI | 170022704 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000154281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTG GACACTTCCA GCTTACAAAT TGCCTGATTG CCGCCCCGAT GGCGGGTATC
ACAGATCGCC CCTTCAGAGC GCTATGTCAT GGTATGGGGG CTGGGATGGC TGTATCTGAA
ATGCTCTCCT CTAATCCAGA GGTTTGGCGA ACGGATAAGT CGCGTTTACG CATGGTCCAT
GTTGATGAAC CCGGGATTCG TAACGTGCAA ATTGCCGGTA ACGATCCAGA TGAGATGGCA
GCAGCCGCCA GAATCAATGT GGCGAGTGGT GCCCAAATCA TCGATATCAA TATGGGATGT
CCAGCCAAGA AAGTGAACCG CAAACTGGCG GGTTCTGCAT TATTGCAGCA TCCTGATCTG
GTCAAACAGA TCCTCTCCGC AGTGGTTAAT GCGGTAGATG TGCCGGTGAC GTTGAAGATC
CGGACGGGTT GGTCACCAGA ACACCGTAAC TGTATAGAAA TTGCCCAACT GGCCGAAAAT
TGTGGTATAC AAGCCCTGAC GATTCATGGC CGAACCCGTT CTTGCCTGTT TAATGGTGAG
GCGGAATACG ACAGTATTCG AGCAGTTAAG CAGACTGTTT CCATTCCCGT TATCGCGAAT
GGTGACATCA CTGACCCGCA TAAAGCCAGA GCGGTACTCG ACTACACTGG AGCTGATGCT
CTGATGATAG GCCGTGCCGC TCAGGGAAGA CCGTGGATCT TCCGGGAAAT CCAGCATTAT
CTGGACACTG GGGAACTGCT GCCACCGATG CCACTTGGCG AAGTGCAGCG TTTGTTAGAC
GGGCATATAC GGGAATTGCA CGACTTTTAT GGTCCAGGCA AGGGATTTCG TATTGCACGT
AAGCACGTCT CTTGGTATCT CCAAGAGCAC GCCCCTAACG ACCAGTTTCG GCGCACATTC
AACGCCATTG AGGATGCCAG CGAACAGCTG GAGGCGTTGG AGGCATATTT CGAAAATCTT
GCGTAA
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| Protein sequence | MRIGHFQLTN CLIAAPMAGI TDRPFRALCH GMGAGMAVSE MLSSNPEVWR TDKSRLRMVH
VDEPGIRNVQ IAGNDPDEMA AAARINVASG AQIIDINMGC PAKKVNRKLA GSALLQHPDL
VKQILSAVVN AVDVPVTLKI RTGWSPEHRN CIEIAQLAEN CGIQALTIHG RTRSCLFNGE
AEYDSIRAVK QTVSIPVIAN GDITDPHKAR AVLDYTGADA LMIGRAAQGR PWIFREIQHY
LDTGELLPPM PLGEVQRLLD GHIRELHDFY GPGKGFRIAR KHVSWYLQEH APNDQFRRTF
NAIEDASEQL EALEAYFENL A
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