Gene YPK_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0450 
Symbol 
ID6090750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp490795 
End bp491469 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content52% 
IMG OID641595512 
ProductGntR family transcriptional regulator 
Protein accessionYP_001719206 
Protein GI170022701 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.256428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGCGG GAATGGGTGT GATTAAACCT GAGACCTTGC GCTATCAGGT TGAAAATGTA 
CTGCGGCAAG CGATCATGTC AGGGCGTTTT ACACCAGGGG AGCGGCTGAT TGAACGAGAA 
CTGTGTGAAA CCTTAGGCGT CAGCCGGACA TCAATTCGTG AAGCTTTACG TAGGCTTGAA 
GCTGAAAAAC TGGTCTCCAT TGTGCCGCAC AAAGGCCCGA TAGTGGCGAT TATCTCCAGG 
CAAGAAGCTG CTGAGTTATT CGCCCTGCGC GGTCTCTTGG AGGGGTTTGC CGCCCGTGAA 
TTTGCCCAAC GGGCAACGGA TGTAGCGATT GTGCATTTCG CACAAGCTAT TCAGGCGCTG 
CGCATGGCAG GCATGACAAA GGATCGGGCC AAGGTACTGA AGGCGAAAAC AGATCTTTAT 
GACGTGTTGC TGGACAATTG TGGCAATGGG TTGGTGAAAG AGACCTTAAC CAGCTTACAT 
TCGCGGATTA ACTTATTGCG CGCGACTTCG CTAATGGATC CGCAGCGTTT ACCTGTCAGC 
ATTAATGAGA TCGACGATCT GTATCAGGCG TTAAAAGCGC GGGATCCCGA TGCGGCACAG 
GCAGCGGCAG AACGGCATGT CGCCAATGCA AAAGAAGTTG CTCTGCGGAT CCTTGAGGAG 
ACCAACGCGA CGTAG
 
Protein sequence
MLAGMGVIKP ETLRYQVENV LRQAIMSGRF TPGERLIERE LCETLGVSRT SIREALRRLE 
AEKLVSIVPH KGPIVAIISR QEAAELFALR GLLEGFAARE FAQRATDVAI VHFAQAIQAL 
RMAGMTKDRA KVLKAKTDLY DVLLDNCGNG LVKETLTSLH SRINLLRATS LMDPQRLPVS 
INEIDDLYQA LKARDPDAAQ AAAERHVANA KEVALRILEE TNAT