Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0415 |
Symbol | |
ID | 6089020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 455502 |
End bp | 456368 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641595479 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001719173 |
Protein GI | 170022668 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.547266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGAA CGCAGGTCGT GGCGAACTGG TATCGAGAGT CGGATGAGTT TTCGACGTTG GTGAACTACC GGATTCTGCG TGCGGGTCAT ATTCGTGCAG CCGATAATTT TCATGTACGC CGTCAGTCTG TTGCCGGTCA CGAATTGATT TTTTGTCTCA ATGGTAGTGG ATTTATCCGC CTGGAAAATA ATCTTCATGA AGTTAAAAAG GGTAATCTCG CTTGGTTACC TGTCCGTTGG CCCCATGAAC ATTTTCCAAA TAAACAAGAA CCCTGGGAGA TTTTATGGTT ACGCATTGAT GGCGCTAAAC TCAACAATAT CATGCAGATC CTTGATGTTG CCCAACAACC GGTTTTTGAA TTCACCTCCC CTGAAACCAT CACCGATATT TATCACCGCC TATTTGATTT AATGCAGAGT CATACCCTCG TGGCGGATGC CCATTGCGAT GTGCTGTGTT CCCAACTGAT ATACACCCTG CTGGAGAATC GCAGTTTCGA TGCCACGAAA TCGCCGGTCA TTTCCCATCG TGGGCTGGGT CGGCTGATTT ATCAGATTCA TAGCCATTAC AATGATGACT GGGATATTGA TAAGTTTATG CAGTATTGCC AAGTGAGTAA GTCGCAACTT TTTCGATTAT TTCAGGAGAC ATTTAATCAA AGCCCTTTGA GATGGCTTAA AAATTACCGC CTTTCCCAAG CGCGTCGTTT ATTAGTGGAA ACCGAGGAGA CCATTAGCCG TATTGCTGGG CAGGTGGGGT ATAACGACCC GCTGCATTTT TCCCGTGATT TTCATCGGTC AGTCGGTTTA TCCCCAAGTG ATTTTCGCCG CCAGGAGCGG CAATTGGATA ATGACCGTCA CGACTGA
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Protein sequence | MQRTQVVANW YRESDEFSTL VNYRILRAGH IRAADNFHVR RQSVAGHELI FCLNGSGFIR LENNLHEVKK GNLAWLPVRW PHEHFPNKQE PWEILWLRID GAKLNNIMQI LDVAQQPVFE FTSPETITDI YHRLFDLMQS HTLVADAHCD VLCSQLIYTL LENRSFDATK SPVISHRGLG RLIYQIHSHY NDDWDIDKFM QYCQVSKSQL FRLFQETFNQ SPLRWLKNYR LSQARRLLVE TEETISRIAG QVGYNDPLHF SRDFHRSVGL SPSDFRRQER QLDNDRHD
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