Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0351 |
Symbol | hemE |
ID | 6088485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 376792 |
End bp | 377859 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595416 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_001719114 |
Protein GI | 170022609 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.777116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGT TGAAAAACGA TCGCTATCTG CGTGCTTTGC TACGTCAGCC TGTAGACATG ACACCGGTAT GGATGATGCG GCAGGCAGGC CGTTATTTGC CAGAATATAA AGCAACCCGC GCTATTGCTG GGGATTTTAT GTCACTGTGC AAAAATGCAG AGTTAGCCTG TGAGGTCACG ATGCAGCCAC TGCGTCGTTA TCCGCTGGAT GCAGCGATTC TGTTTTCCGA CATTCTGACC ATCCCTGATG CCATGGGGCT GGGGCTCTAT TTTGAAACTG GCGAAGGCCC GCGTTTTCAA TCCCCAATTA CTTGCCGGGC TGATGTTGAA AAATTGCCGA TCCCCGATCC TGAGCAAGAA TTGGGTTATG TGATGAATGC GGTGCGGACC ATTCGTCGCG AACTGGCCGG TTCGGTGCCC TTAATCGGTT TTTCCGGTAG CCCATGGACT CTGGCGACCT ATATGGTTGA AGGCGGCAGT AGTAAAGCCT TTACCAAACT GAAAAAAATG ATGTATGCCG AACCGCAGAC CTTGCACTTG CTGCTGGATA AACTGGCAGA CAGTGTCATT TTGTATCTTA ATGCCCAAAT CAAGGCGGGG GCTCAATCGG TCATGATCTT TGATACCTGG GGAGGGGTAC TGACAGGCCG TGATTATCAT GAGTTCTCAT TGAATTATAT GCATAAAATT GTCGATGGTT TGATCCGCGA AAACGAAGGT CGTCGGGTTC CTGTCACTTT GTTCACCAAG GGCGGGGGGC CGTGGCTGGA AGCGATGGCC GCCACCGGTT GTGATGCGCT GGGTCTAGAC TGGACAACGG ATATCGCGGA TGCGCGTCGT CGTGTTGGTG ATAAAGTTGC CTTGCAAGGC AACATGGATC CTTCGGTTCT GTATGCACCC CCTGCGCGTA TTGAGCAGGA GGTTAGTACC ATTCTGGCGA GCTTTGGCCA GGGTGAAGGG CATGTATTTA ATCTGGGCCA CGGGATTCAC CAAGATGTAC CGCCAGCACA TGCCGGTGCA TTTGTGAACG CGGTACATGC GCTATCACGG CCTTATCATC AAAAATAA
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Protein sequence | MNELKNDRYL RALLRQPVDM TPVWMMRQAG RYLPEYKATR AIAGDFMSLC KNAELACEVT MQPLRRYPLD AAILFSDILT IPDAMGLGLY FETGEGPRFQ SPITCRADVE KLPIPDPEQE LGYVMNAVRT IRRELAGSVP LIGFSGSPWT LATYMVEGGS SKAFTKLKKM MYAEPQTLHL LLDKLADSVI LYLNAQIKAG AQSVMIFDTW GGVLTGRDYH EFSLNYMHKI VDGLIRENEG RRVPVTLFTK GGGPWLEAMA ATGCDALGLD WTTDIADARR RVGDKVALQG NMDPSVLYAP PARIEQEVST ILASFGQGEG HVFNLGHGIH QDVPPAHAGA FVNAVHALSR PYHQK
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