| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0347 |
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| Symbol | |
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| ID | 6090852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 371987 |
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| End bp | 374032 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595412 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001719110 |
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| Protein GI | 170022605 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATA ATACAACGTC ATTACCCGCT GAAAATTCGT CACACCCACG TAAAGGCACA
CCTATTCGTA AAAAGCAGCG CGAAGAGGCC CAACAGTTTA TTAATACCTT ACAAGGCGTT
ACTTTCCCCA ACTCCCAACG TATTTATCTA CAAGGCTCTC GGCCCGATAT TCAAGTGCCG
ATGCGTGAAA TCCAACTCAG CCCGACGCAA ATCGGCGGCA GTAAAAACGA ACCACGCTAT
GAAGATAATG AGGCCATCCC GGTCTATGAC ACCTCCGGTC CCTATGGTGA CCCACAAGCT
AAACTGGATG TTCACAACGG GCTGCCTAAA CTGCGTGCCG CTTGGGTCGC TGATCGCCAA
GATACTGAAG CGCTGGCATC TGTCAGTTCC GGCTTTACCC AACAGCGTTT GGCTGATGAA
GGCCTGGACC ATTTACGTTT TGAGCATCTA CCCCGCCCAC GGAAAGCAGC CACTGGTCAA
TGTGTGACTC AGTTGCATTA CGCCCGACAG GGGAAAATCA CGCCAGAGAT GGAGTTTATC
GCCCTACGGG AAAATATGGG CCGTGAACGT ATTCGGGGTG AAGTCTTGCT TCAACAACAT
CCGGGACAAG CGTTTGGTGC CCATCTGCCG GAAAATATCA CCGCCGAGTT TGTGCGTCAG
GAAGTGGCGG CCGGCCGAGC CATCATCCCC GCCAATATTA ATCACCCAGA ATCTGAACCA
ATGATTATTG GCCGTAATTT TCTGGTCAAA GTGAATGCCA ACATCGGTAA TTCCGCCGTG
ACCTCTTCCA TTGAAGAAGA GGTAGAAAAA CTGGTCTGGT CTACCCGCTG GGGGGCCGAT
ACGGTGATGG ACTTATCTAC GGGCCGCTAT ATTCATGAAA CGCGGGAATG GATCCTACGT
AACAGCCCGG TCCCTATTGG CACGGTACCT ATCTATCAGG CGCTGGAAAA AGTTAATGGC
GTGGCCGAAA ACCTGACCTG GGAAATGTTC CGTGACACCC TGTTAGAGCA GGCAGAGCAA
GGGGTAGACT ATTTTACTCT CCACGCGGGG GTCTTGTTGC GCTATGTGCC GATGACTGCC
AAACGCCTAA CCGGTATCGT CTCTCGCGGC GGTTCAATTA TGGCAAAATG GTGCCTTTCG
CATCATCAGG AAAACTTCCT GTATCAGCAT TTCCGCGAAA TCTGTCAGAT TTGTGCAGCC
TATGACGTTT CATTATCACT GGGCGATGGC CTGCGCCCTG GCTCTATTCA AGATGCCAAT
GATGAGGCCC AATTCGCCGA ACTGCATACC TTGGGTGAAT TGACCAAAAT CGCCTGGGAG
TATGATGTAC AGGTGATGAT CGAAGGCCCA GGGCATGTGC CGATGCAGAT GATCCGCCGC
AATATGACCG AGGAACTGGA ACACTGCCAC GAAGCGCCAT TTTATACCTT AGGCCCACTG
ACCACGGACA TCGCACCGGG CTATGACCAC TTTACCTCAG GGATTGGTGC AGCGATGATC
GGCTGGTTCG GTTGCTCCAT GCTCTGTTAT GTCACCCCCA AAGAGCACCT TGGTCTGCCG
AATAAAGAGG ATGTCAAACA GGGGCTTATT ACTTACAAAA TTGCCGCGCA CGCCGCAGAT
TTGGCTAAAG GCCACCCCGG TGCGCAAATT CGTGATAACG CCATGTCCAA AGCTCGCTTT
GAGTTCCGCT GGGAAGATCA ATTCAATTTG GCGCTTGATC CAGCAACAGC CCGCGCTTAC
CACGATGAAA CCTTGCCGCA AGAGTCCGGG AAAGTCGCTC ATTTTTGTTC CATGTGCGGC
CCGAAATTCT GTTCAATGAA AATCTCACAA GAGGTCCGCG ATTATGCTGC GGCACAAGAA
CAAGCGGCCG CACAAGCACA AGCCGCTACA CCAACCACCG CAGCACAACC AATAGACATC
ACGCAGCCAA TTAATATGCT GCAATCAGGG ATGGAAAAAA TGTCGGCCGA GTTTCGCTCC
CGTGGCAGTG AGCTATACCA CCGCCCGGCG AATCTGAGTG CGGAGGCCAA TAATGAGCCA
ACTTGA
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| Protein sequence | MSNNTTSLPA ENSSHPRKGT PIRKKQREEA QQFINTLQGV TFPNSQRIYL QGSRPDIQVP
MREIQLSPTQ IGGSKNEPRY EDNEAIPVYD TSGPYGDPQA KLDVHNGLPK LRAAWVADRQ
DTEALASVSS GFTQQRLADE GLDHLRFEHL PRPRKAATGQ CVTQLHYARQ GKITPEMEFI
ALRENMGRER IRGEVLLQQH PGQAFGAHLP ENITAEFVRQ EVAAGRAIIP ANINHPESEP
MIIGRNFLVK VNANIGNSAV TSSIEEEVEK LVWSTRWGAD TVMDLSTGRY IHETREWILR
NSPVPIGTVP IYQALEKVNG VAENLTWEMF RDTLLEQAEQ GVDYFTLHAG VLLRYVPMTA
KRLTGIVSRG GSIMAKWCLS HHQENFLYQH FREICQICAA YDVSLSLGDG LRPGSIQDAN
DEAQFAELHT LGELTKIAWE YDVQVMIEGP GHVPMQMIRR NMTEELEHCH EAPFYTLGPL
TTDIAPGYDH FTSGIGAAMI GWFGCSMLCY VTPKEHLGLP NKEDVKQGLI TYKIAAHAAD
LAKGHPGAQI RDNAMSKARF EFRWEDQFNL ALDPATARAY HDETLPQESG KVAHFCSMCG
PKFCSMKISQ EVRDYAAAQE QAAAQAQAAT PTTAAQPIDI TQPINMLQSG MEKMSAEFRS
RGSELYHRPA NLSAEANNEP T
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