Gene YPK_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0322 
Symbol 
ID6090546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp342885 
End bp343427 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID641595382 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001719088 
Protein GI170022583 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000287366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGACT CTATCCGCCC TTATCTTCAT CATTCACCGA CTTTAGGTAA ACGAGTCATG 
ATCGATAGAT CGAGTGTGAT CATTGGCAAT GTTATTTTAG GTGATGATGT CAGTGTCTGG
CCATTAGTCG CCATTCGTGG CGATGTTAAT CAAGTCATCA TTGGGGCACG TTCAAATATC
CAAGACGGTA GTGTGCTACA TGTTACCCAC CAATCTGAGC ATAATCCTGA AGGGTATCCG
TTAATCATTG GTGAAGACGT GACTATTGGT CATAAAGCCA TGCTACACGG CTGTACCATT
GGTAACAGAG TATTAGTGGG TATGGGATCT ATTCTATTAG ATGGAACAAT AATAGAAGAT
GATGTAATGA TTGGTGCAGG TAGCCTCATT GCTCCAGGTA AACGCTTAGT TAGTGGCTAT
CTTTATGTGG GCAGCCCAGC GAAGCAAATA CGCCCATTAA CACCCTTAGA GTTAGAAGGC
CTGCTTTACT CTGCTGGCAA CTACGTTCGC TGGAAAGATG ACTATCTGGC AGAGTCTAAA
TAA
 
Protein sequence
MCDSIRPYLH HSPTLGKRVM IDRSSVIIGN VILGDDVSVW PLVAIRGDVN QVIIGARSNI 
QDGSVLHVTH QSEHNPEGYP LIIGEDVTIG HKAMLHGCTI GNRVLVGMGS ILLDGTIIED
DVMIGAGSLI APGKRLVSGY LYVGSPAKQI RPLTPLELEG LLYSAGNYVR WKDDYLAESK