Gene YPK_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0320 
Symbol 
ID6088940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp341428 
End bp342000 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content47% 
IMG OID641595380 
Productputative ribosome maturation factor 
Protein accessionYP_001719086 
Protein GI170022581 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00340055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAC AAGAAAATAA TTTTGTGCTG GCGGATATAG TGCGGGCATT GCGGCAAGAA 
GAGGTTATCG CTTATCCGAC AGAAGCAGTT TTTGGTTTAG GATGCGATCC CGATAGTGAA
AAAGCGGTTA ATACTTTGCT AGCGTTAAAA CAGCGGCCAT GGCAGAAAGG TTTGATCTTG
GTTGCCGCTA ATTATGCTCA GTTAGAGCCT TATATTAATG ATTCAATGCT TAATGAAATA
CAACGAGAAA CCCTCTTTTC CACTTGGCCG GGGCCGATAA CGTGGGTGAT ACCTGCCCGA
GTAGAAACAC CGCAATGGCT AACAGGCTGT TTTGACTCAT TGGCGGTGAG AGTAAGCAAT
CACCCACTTG TACAGCAGCT TTGTGCGGAA TATGGCAAGC CGTTAGTGTC AACTAGCGCT
AATTTAAGTG GGCATGAGCC GTGCCGCACG GAAGAAGAAG TCAGAATACA GTTTGGCCCT
TCATTACCGG TGTTATCCGG TCACGTTGGT GGCCGTTTGA ATCCATCTGA AATCAGAGAT
GCCTTAACGG GTAAGCGGTT TCGCCAAGGG TAG
 
Protein sequence
MNQQENNFVL ADIVRALRQE EVIAYPTEAV FGLGCDPDSE KAVNTLLALK QRPWQKGLIL 
VAANYAQLEP YINDSMLNEI QRETLFSTWP GPITWVIPAR VETPQWLTGC FDSLAVRVSN
HPLVQQLCAE YGKPLVSTSA NLSGHEPCRT EEEVRIQFGP SLPVLSGHVG GRLNPSEIRD
ALTGKRFRQG