Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0297 |
Symbol | rpsH |
ID | 6088488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 326088 |
End bp | 326480 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641595357 |
Product | 30S ribosomal protein S8 |
Protein accession | YP_001719063 |
Protein GI | 170022558 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000747182 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAAGCCGCA AACAAAGTTG CGGTCACCAT GCCCTCCTCC AAGCTGAAAG TGGCAATTGC CAACGTTCTG AAGGAAGAAG GCTTTATTGA AGATTTTAAA ATCGAAGGCG ACACCAAGCC TGTTCTGGAA TTAGCACTTA AGTACTTCCA GGGTAAGGCA GTGGTAGAAA GCATTCAACG TATCAGCCGT CCAGGTCTGC GCATCTATAA GAAAAAAGAT GAGCTGCCAA AAGTTATGGC CGGTTTGGGT ATCGCTGTTA TTTCTACCTC TAAAGGTGTT ATGACCGATC GTGCAGCTCG CCAAGCTGGT CTTGGTGGCG AGATTATCTG CTACGTAGCT TAA
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Protein sequence | MSMQDPIADM LTRIRNGQAA NKVAVTMPSS KLKVAIANVL KEEGFIEDFK IEGDTKPVLE LALKYFQGKA VVESIQRISR PGLRIYKKKD ELPKVMAGLG IAVISTSKGV MTDRAARQAG LGGEIICYVA
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