Gene YPK_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0276 
Symbol 
ID6087334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp313408 
End bp313878 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID641595336 
Product30S ribosomal protein S7 
Protein accessionYP_001719042 
Protein GI170022537 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000211572 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGTC GTCGTGTAAT TGGCCAACGT AAAATTTTAC CAGATCCTAA GTTCGGATCT 
GAATTGCTGG CTAAATTTGT AAATATCCTG ATGGTAGATG GTAAAAAATC TACTGCAGAA
GCAATTGTCT ATACCGCGCT GGAGACCCTG GCTCAGCGTT CTGGTAAAGA TTTTCTGGAA
GCTTTTGAAG TAGCTCTGGA TAACGTGCGC CCGACTGTCG AAGTTAAGTC TCGCCGCGTT
GGTGGTTCTA CTTATCAGGT ACCAGTTGAA GTTCGTCCGG TTCGTCGTAA TGCCTTGGCA
ATGCGTTGGA TCGTTGATGC TGCTCGTAAA CGCGGTGATA AATCCATGGC TTTGCGCTTG
GCGAATGAAC TGTCTGACGC AGCAGAGAAC AAAGGTTCTG CTGTTAAGAA ACGTGAAGAC
GTTCACCGTA TGGCCGAAGC TAACAAGGCG TTCGCCCACT ACCGCTGGTA A
 
Protein sequence
MPRRRVIGQR KILPDPKFGS ELLAKFVNIL MVDGKKSTAE AIVYTALETL AQRSGKDFLE 
AFEVALDNVR PTVEVKSRRV GGSTYQVPVE VRPVRRNALA MRWIVDAARK RGDKSMALRL
ANELSDAAEN KGSAVKKRED VHRMAEANKA FAHYRW