| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0275 |
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| Symbol | rpsL |
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| ID | 6090074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 312937 |
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| End bp | 313311 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641595335 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001719041 |
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| Protein GI | 170022536 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000516158 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACGA TTAACCAGCT GGTTCGCAAG CCACGCAGCA TGAAGGTTGC TAAAAGCAAC
GTTCCTGCGT TGGAAGCATG CCCGCAGAAA CGTGGTGTAT GTACCCGCGT ATATACAACC
ACTCCGAAAA AACCTAACTC CGCACTGCGT AAAGTTTGCC GTGTGCGTTT GACTAACGGT
TTTGAAGTCA CCTCTTACAT TGGTGGTGAA GGTCATAACC TACAGGAACA CTCCGTGATC
CTGATCCGTG GCGGTCGTGT TAAAGACTTG CCAGGTGTGC GTTACCACAC CGTTCGCGGC
GCGCTTGACT GCTCAGGTGT TAAAGACCGT AAGCAATCAC GTTCTAAGTA CGGCGTGAAG
AAGCCAAAGG CTTAA
|
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| Protein sequence | MATINQLVRK PRSMKVAKSN VPALEACPQK RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCSGVKDR KQSRSKYGVK
KPKA
|
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