Gene YPK_0258 details

Gene Information

• Locus tag: YPK_0258
• Symbol: tauA
• ID: 6087091
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 297997
• End bp: 299058
• Gene Length: 1062 bp
• Protein Length: 353 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641595318
• Product: taurine transporter substrate binding subunit
• Protein accession: YP_001719024
• Protein GI: 170022519
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG4521] ABC-type taurine transport system, periplasmic component
• TIGRFAM ID: [TIGR01729] taurine ABC transporter, periplasmic binding protein

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATAA CTTTTTCTTC GGCAACCCTT GCCGCTTCAA GACGCAGCTT TTTACAACTC 
CGCACGATTT TATTGGCCTC GTTACTGCCA GCTTCATTAC TGCTCGCCAC CAGCGCGCAG 
GCAGTCGATG TCATCGTGGC TTATCAAACC TCTGCTGAAC CGGCAAAGGT CGCGCAGGCA 
GATAACAGTT TTGCCAAACT CTCTGGTGCC AACGTGGATT GGCGCAAATT TGATAGCGGT 
TCCAGCGTTG TCAGGGCGCT AGCTTCTGGT GATGTGCAGA TTGGTAATAT TGGCTCCAGC 
CCACTCGCTG TCGCTGCCAG TCAAAATGTA CCGATTGAAG TTTTCCTTCT GGCCTCACAA 
CTGGGTAGCT CTGAAGCCTT GGTGGTGAAA AAAGAGATCA AAACGCCACA GGATTTGATT 
GGTAAACGTA TTGCTGTGCC GTTTATTTCT ACCGCCCATT ACAGCTTGCT GGCGGCGTTG 
AAGCATTGGG GGATTAAACC GGGCCAAGTC ACCATCCTCA ACTTACAACC CCCGGCTATC 
GCCGCCGCCT GGCAGCGTGG TGATATTGAC GGCGCTTATG TTTGGGCACC TGCCGTGAGT 
GAATTAGCCA AAACCGGTAC GGTACTAACC GATTCAGCCC AAGTGGGCCA GTGGGGGGCA 
CCAACATTGG ATGTATGGGT AGTGCGCAAA GACTTTGCCA AAGCCCATCC TGAAGTTGTT 
ACCGCCTTTG CCCGCAGTGC ATTGGCAGCA CAAGCCGCTT ATCTGAACAA CCCTGAACAG 
TGGTTGCAAA ATCAAGCGCA TTTAGCCCCA CTCTCTCGCT TGAGTGGTGT GCCCACCGAG 
CAAGTTCCAG CGCTGGTAAA AGGCAATACT TACTTGCCAG TGGCTGAACA GATAACGCAA 
TTAGGTCAGC CGGTGGATCA AGCTATCCGC GATACTGCAG AGTTCCTTAA GCAGCAAGGC 
AAGATCCCTC AAGTTGCCAG TGACTACCGT GATTTTGTCA CTGACCGTTT TGTAAAAGAA 
ATCCAGGCGA CACCGCAATC CCAGGCGACA CCGCAATCCT AG 

 

Protein sequence

MAITFSSATL AASRRSFLQL RTILLASLLP ASLLLATSAQ AVDVIVAYQT SAEPAKVAQA 
DNSFAKLSGA NVDWRKFDSG SSVVRALASG DVQIGNIGSS PLAVAASQNV PIEVFLLASQ 
LGSSEALVVK KEIKTPQDLI GKRIAVPFIS TAHYSLLAAL KHWGIKPGQV TILNLQPPAI 
AAAWQRGDID GAYVWAPAVS ELAKTGTVLT DSAQVGQWGA PTLDVWVVRK DFAKAHPEVV 
TAFARSALAA QAAYLNNPEQ WLQNQAHLAP LSRLSGVPTE QVPALVKGNT YLPVAEQITQ 
LGQPVDQAIR DTAEFLKQQG KIPQVASDYR DFVTDRFVKE IQATPQSQAT PQS