| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0247 |
|---|
| Symbol | |
|---|
| ID | 6090642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 288837 |
|---|
| End bp | 290957 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641595307 |
|---|
| Product | YccS/YhfK family integral membrane protein |
|---|
| Protein accession | YP_001719013 |
|---|
| Protein GI | 170022508 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1289] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01667] integral membrane protein, YccS/YhfK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGC AACGGCTTAT TTATCATCCT GAAGTTAACT ACGCACTACG CCAAACATTG
GTCCTTTGCC TGCCGGCAGC GTTGGGGTTT GCTATCGGTG ATTTACGGCT TGGGTTGATG
TTTTCCCTGA TACCTGCCTG CTGCAATATT GCTTCCCTAG ATACACCGCA CCAACATTTT
TTCCGACGTC TGATTATTGG CGGCGTACTC TTTACGCTAA GCAGTTTCCT GACTCAACAA
CTGTTGCTAT GGCATATCCC CTTGCCTGTG ATTATGCTCG GACTAGCATT GATAGTGGGT
GTCAGCGGTG CGATTAGCCC ACTAAATGGC CGTCTACTTC CCGCGGTCTT GATCGCCGCC
ATTTTCAGTC TCAGCATGGT GGGCCGCGCC CCTATCTGGC AGGCCCCCTT GCTCTGTGCC
GTGGGGACGC TTTGGTATGG CGTATTTAAC TGGTTGTGGT TCCGGTTATG TAAAGACCAA
CCTATTCGCG AGCCACTGAG CCAGCTTTAT CATTTATTGG CCGATTACTG TGATGCTAAA
TACAGCCGGC TTACCCAGCA TCTTGAACCC GAAAAAGCGA TACCACCGCT ACTCGATAGA
CAACAAGGAA TGATGGATAA AGTTAATCAG CTTTATCAAC AATTTAACTT GTTGCACAAC
ACCACCAAGA AAGAGCAAAA GCGTTTGTTG GGACTGTTTC AGATGGCGCT GGATTTACAA
GAGCACATCA CTGCAGCGCT GAATCAGCCA GAAGAAATGC AAGAGCTGAT AAAAAAGACG
CCCATAGAAG CGGTGACTCA GAGTAATGCG CAAATTATTT CAGCCCAAAT GCGCGCCATT
GCTGATGACA TTCTCTATCA CCGCCGCACC GTAGAACACT TCACCGCTGG TATCCCTTTA
GCCGAGCTGG AAACGATCGC ACAGCAAAAT CCCGACAACC CGGTGGCACA ATTTTGTTAC
TACCACATTA GCCATATCAC CCAAATACTG AGCGACCGCC GTCCACTGTA TAACCGCGAC
TTGATGTCCA GTCAGTTGTC GCAACCTTTT TGGCCTGCTC TGGTAAGTTA TTTGTCGTTT
AAATCCAGTG CGCTACGAGA TGCCGCCCGA ATAGGAGTGA CACTGGCCGT AGGCAGTTAT
ATTGGTGTAT TGATCAACCT CCCCAAACCC TATTGGATTT TGCTCACAAT AATGTTGGTG
ATGCAAAACG GTTATAACGC CACGCGGGTG CGGATCCATC ACCGTGCGTT GGGCACCCTG
GTAGGGCTGA TACTGACGGC GGGCTTGCTG CACCTACAAC TGACAGAAAT CACCACCCTC
GGCATTATGT TACTGATCAC ACTGCTGTCT TATTTAGTAC AGCGTAAAAA TTATGGTCTG
GCGGTTGTGG GTAGAACGAT AACCGCCGTG TATATCGTGC AGTTATTGAC CGGGGAAGGC
GCTAACTTTT TAGTCCCACG TCTACTGGAT ACCTTAATCG GTTGTGCCTT GGCACTTGGC
AGTGCGTTAT GGCTTTGGCC TCAGTGGCAG AGCGGGTTGT TGCGTAAAAA TGCCCATCAG
GCACTGGAGG CTTATCAGAC GATCCTGCGT TTGCTACTGA CCCCTCATCC TGACATTACG
CAATTAGATT ATGAGCGTTT TAACGTGAAT AAGGCCAGCA ACACCGTTTT AAGTTCACTA
AATCAGGCAA TGCAAGAACC GGGATTCAAT TCAAAATATT TGGCAGATAT GCGCCTTTGG
GCCGCCCATG GCGAGTTGAT TGTTTGCCAT ATCAATGAGA TGACAACGCT GATCAGAGAG
AATCCATTGA CTGAGGTGGA CTCACCATCA ACCAATGGTC ATCCACTCAT GAGCACTAAA
CTGGCCGCAA GCTATTTACA GCTATGTGAG ATGGCCATCC AGTTGTGCCA ACAACGGCTG
GAATCGGATA ATCTTGAGGA CAATGATAGC GTCGTTCAGA TACCCGATAT GGCTCCAGAT
ACCCAAGCCT CAGAGCTAGA ACGTAATTTA CGCAGGGTTC TATCACACTT AAACGTGATG
CACACCGTTT CTGCCATGGC ATGGCAACAG CAGCCACATC ATGGCATATG GCGCAGCCGG
AAGTTACGGG ATAATACGTA A
|
|---|
| Protein sequence | MKWQRLIYHP EVNYALRQTL VLCLPAALGF AIGDLRLGLM FSLIPACCNI ASLDTPHQHF
FRRLIIGGVL FTLSSFLTQQ LLLWHIPLPV IMLGLALIVG VSGAISPLNG RLLPAVLIAA
IFSLSMVGRA PIWQAPLLCA VGTLWYGVFN WLWFRLCKDQ PIREPLSQLY HLLADYCDAK
YSRLTQHLEP EKAIPPLLDR QQGMMDKVNQ LYQQFNLLHN TTKKEQKRLL GLFQMALDLQ
EHITAALNQP EEMQELIKKT PIEAVTQSNA QIISAQMRAI ADDILYHRRT VEHFTAGIPL
AELETIAQQN PDNPVAQFCY YHISHITQIL SDRRPLYNRD LMSSQLSQPF WPALVSYLSF
KSSALRDAAR IGVTLAVGSY IGVLINLPKP YWILLTIMLV MQNGYNATRV RIHHRALGTL
VGLILTAGLL HLQLTEITTL GIMLLITLLS YLVQRKNYGL AVVGRTITAV YIVQLLTGEG
ANFLVPRLLD TLIGCALALG SALWLWPQWQ SGLLRKNAHQ ALEAYQTILR LLLTPHPDIT
QLDYERFNVN KASNTVLSSL NQAMQEPGFN SKYLADMRLW AAHGELIVCH INEMTTLIRE
NPLTEVDSPS TNGHPLMSTK LAASYLQLCE MAIQLCQQRL ESDNLEDNDS VVQIPDMAPD
TQASELERNL RRVLSHLNVM HTVSAMAWQQ QPHHGIWRSR KLRDNT
|
|---|
| |