Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0226 |
Symbol | aroB |
ID | 6091228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 264031 |
End bp | 265119 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641595286 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_001718992 |
Protein GI | 170022487 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000635548 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAGA TTACTGTCAC GTTAGGGGAA CGTAGCTACC CCATTACGAT TGCCGCCGGG TTGTTTAATG ATCCGGCCTC TTTTAAGCCG CTAAAGGCGG GTGACCAGGT TATGCTGGTC ACTAACCAAA CGTTGGCTCC GCTCTATCTG GATTCTCTCC GGGCAGTGTT GGAACACGGT GGCATTAAAG TTGATCAGGT GATTTTACCT GATGGTGAGC AGTATAAATC TCTGAGCGTT ATGGAGCAGG TTTTTTCTGC CCTTCTGGAA AAACCGCACG GTCGTGATAC TACGTTGGTT GCCTTAGGTG GCGGCGTAGT GGGCGACCTG ACCGGTTTTG CCGCAGCTTG CTATCAACGC GGTGTGCGCT TTATTCAAGT TCCTACTACT TTACTTTCTC AAGTGGATTC TTCTGTTGGT GGTAAAACCG CCGTTAACCA TCCCTTGGGT AAAAATATGA TTGGTGCCTT CTACCAGCCT GCATCGGTGG TGGTTGATCT TAATTGTCTT AAAACTCTCC CCCCGCGTGA ACTCGCTTCT GGCTTGGCTG AAGTGATCAA ATACGGCATC ATCCTTGATG CAGCTTTCTT CGATTGGTTA GAAAACAACA TTGACGCTTT ATTAGCGCTG GATATGTCAG CATTAGCTTA CTGTATTCGC CGCTGTTGCG AATTAAAGGC CGATGTCGTT GCTGCTGATG AACGCGAAGA GAGCGGTGCG CGCGCTTTAC TCAATTTGGG TCACACCTAT GGTCATGCTA TCGAAGCTGA AATGGGCTAC GGAGTGTGGT TACACGGTGA AGCGGTTGCT GCTGGGATGG TGATGGCCGC ACAGACATCC CGTCGTCTGG GGCAACTCTC TGTCAGTGAT GTTGAGCGTA TCAAGAAACT CCTATTACGT GCTGGTCTAC CCGTTTGTGG GCCTAAAGAA ATGGCACCAG AATCTTATCT GCCACACATG ATGCGGGATA AAAAAGTATT GGCGGGTGAA CTTCGTCTGG TACTGCCAAC GGCCATCGGT AAATCAGAAA TCCGGGGCGG TGTTGCGCAT GATATGGTGT TGGCATCGAT AGCGGATTGT CGGCCATAG
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Protein sequence | MEKITVTLGE RSYPITIAAG LFNDPASFKP LKAGDQVMLV TNQTLAPLYL DSLRAVLEHG GIKVDQVILP DGEQYKSLSV MEQVFSALLE KPHGRDTTLV ALGGGVVGDL TGFAAACYQR GVRFIQVPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP ASVVVDLNCL KTLPPRELAS GLAEVIKYGI ILDAAFFDWL ENNIDALLAL DMSALAYCIR RCCELKADVV AADEREESGA RALLNLGHTY GHAIEAEMGY GVWLHGEAVA AGMVMAAQTS RRLGQLSVSD VERIKKLLLR AGLPVCGPKE MAPESYLPHM MRDKKVLAGE LRLVLPTAIG KSEIRGGVAH DMVLASIADC RP
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