Gene YPK_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0225 
SymbolaroK 
ID6091253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp263453 
End bp263974 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID641595285 
Productshikimate kinase I 
Protein accessionYP_001718991 
Protein GI170022486 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.52096e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AACGCAATAT CTTTCTGGTT GGGCCTATGG GTGCCGGCAA AAGCACTATT 
GGTCGTCAGT TAGCTCAGCA ACTCAATATG GAGTTTTTCG ACTCTGATCA AGAAATTGAG
CGACGTACCG GAGCTGACGT GGGCTGGGTA TTCGACGTGG AAGGCGAAGA AGGTTTCCGC
GATCGTGAAG AAAAAGTGAT TAATGAACTG ACGGAAAAGC AAGGCATTGT TCTGGCAACC
GGTGGGGGCT CTGTTAAATC CAGAGAAACC CGTAACCGTT TGTCAGCCCG TGGGGTTGTG
GTGTATTTAG AAACCACTAT CGAGAAGCAG TTAGCCCGTA CACAGCGTGA CAAAAAACGT
CCGTTGCTAC AGGTCGATGA ACCTCCACGT GAAGTGTTAG AAGCACTGGC AAAAGAACGT
AATCCGTTGT ACGAAGAAAT TGCAGATGTC ACTATCCGCA CTGACGATCA AAGCGCGAAA
GTGGTTGCTA ACCAGATTAT CAACATGCTG GAAAGTAACT GA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRQLAQQLNM EFFDSDQEIE RRTGADVGWV FDVEGEEGFR 
DREEKVINEL TEKQGIVLAT GGGSVKSRET RNRLSARGVV VYLETTIEKQ LARTQRDKKR
PLLQVDEPPR EVLEALAKER NPLYEEIADV TIRTDDQSAK VVANQIINML ESN