| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0096 |
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| Symbol | |
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| ID | 6089700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 113146 |
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| End bp | 114864 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641595156 |
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| Product | Pectate lyase |
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| Protein accession | YP_001718862 |
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| Protein GI | 170022357 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GAGCATTATT GTTGAGTATG TCAGTGCTGG CAATGCTGTA TATCCCCGCC
GGGCAAGCCG CAGAGATAGA CCGTCTCACC GTAGTTAAGC AGTATGTCGA TAATGTACTG
AACAAAGCAT CAGATACTTA TCACGGTGAT AAACCTAGTC CATTGCTGGC TGATGGTGTT
GACCCCCGAA CCGGGCAGCA AATGGAGTGG ATATTCCCTG ATGGCCGTCG TGCTGTGCTA
TCCAACTTCT CTGCACAACA AAATCTGATG CGGGTTATGA GTGGGCTGAG TGAACTTAGC
GGTGATCCGC AGTACCAAAA GCGTGCTGAA GATATCGTGC GTTACCATTT CCAAAATTAT
CAAGATAATA GCGGCTTGCT CTACTGGGGA GGCCACCGTT TTGTTGATCT GAAAACCTTG
CAGCCGGAAG GGCCGAGCGA AAAAGAGAAA GTCCATGAGC TGAAAAATGC TTATCCCTAT
TATGACCTGA TGTTCAGTGT TGATAGCGAT GCGACCACCC GTTTTATTCG CGGTTTCTGG
AATGCTCATG TGTATGATTG GCGGATCCTT GAAACCAGCC GGCACGGTGA GTACGGTAAG
CCAATGGGGG CATTGTGGGA AAGTACGTTT GAGCAACAAC CTCCTTTCTT TGCGACCAAA
GGGCTCAGTT TCCTTAACGC CGGTAATGAC CTGATCTATT CCGCCTCCCT GCTGTATAAA
TATCAGCAAG ATCAGGGCGC ATTAGTGTGG GCAAAACGTT TGGCTGATCA ATATGTGTTG
CCGCGAGATG CCAAGACTGG CCTCGGTGTC TATCAGTTCA CTCAGGCACT GAAACGTGAA
GAGCCAACAG ATGATGCGGA TACCCATTCC AAGTTTGGCG ACCGTGCACA GCGGCAGTTC
GGACCCGAGT TCGGGCCAAC GGCGCTTGAA GGCAATATGA TGCTCAAAGG GCGCACCAGT
ACCCTTTATT CTGAAAACGC CTTGATGCAA CTGCAACTAG GTAAGGATTT AGGGGGGCAA
GGTGACGATT TACTGAAATG GACCGTGGAT GGCCTGAAAG CTTTCGCCAA ATACGGCTAC
AACGAGCAGG ACAATACGTT CCGCCCGATG ATCGCTAATG GTCAGGATTT ATCGAATTAC
ACTCTGCCAC GTGATGGTTA TTACGGCAAA AAAGGATCGG TACTCAAGCC TTATAAGGCG
GGTAACGAGT TTCTGATTTC CTATGCGCGT GCTTATGCTG TCGATAATGA CCCCTTACTG
TGGAAGGTGG CTCGCGGTAT TGCCAGCGAT CAGGGATTGG GCGATATCGG CAGTGCGCCA
GGCAAAGAGA TGAAGGTCAA ACTGGATACC ACCAATAGCG ATCCGTATGC GCTGTTTGCT
TTGCTGGACC TCTACAATGC CAGCCAGGTC GCTGAGTACC GGTCTTTGGC GGAGAAAGTT
GCCGATAACA TCATCAAAAC GCGTTATATC GACGGTTTCT TTATGGCTTC ACCGGATCGG
CAATATGCCG ATGTGGATGC TATCGAGCCT TATGCTTTGT TGGCATTGGA AGCATCATTG
CGTAACAAAC CACAAGCGGT TGCCCCTTTC CTTAATGGGG CTGGTTTTAC CGAAGGTGCT
TACCTGATGG CAGACGGTTC AGCCCGAATT TCTACCCGTG ACAATGAGCT GTTCTTGCTC
AATGTGGGTG AGACGTTGCA GCCGAATGGC CGTAAATAG
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| Protein sequence | MKKRALLLSM SVLAMLYIPA GQAAEIDRLT VVKQYVDNVL NKASDTYHGD KPSPLLADGV
DPRTGQQMEW IFPDGRRAVL SNFSAQQNLM RVMSGLSELS GDPQYQKRAE DIVRYHFQNY
QDNSGLLYWG GHRFVDLKTL QPEGPSEKEK VHELKNAYPY YDLMFSVDSD ATTRFIRGFW
NAHVYDWRIL ETSRHGEYGK PMGALWESTF EQQPPFFATK GLSFLNAGND LIYSASLLYK
YQQDQGALVW AKRLADQYVL PRDAKTGLGV YQFTQALKRE EPTDDADTHS KFGDRAQRQF
GPEFGPTALE GNMMLKGRTS TLYSENALMQ LQLGKDLGGQ GDDLLKWTVD GLKAFAKYGY
NEQDNTFRPM IANGQDLSNY TLPRDGYYGK KGSVLKPYKA GNEFLISYAR AYAVDNDPLL
WKVARGIASD QGLGDIGSAP GKEMKVKLDT TNSDPYALFA LLDLYNASQV AEYRSLAEKV
ADNIIKTRYI DGFFMASPDR QYADVDAIEP YALLALEASL RNKPQAVAPF LNGAGFTEGA
YLMADGSARI STRDNELFLL NVGETLQPNG RK
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