| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0089 |
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| Symbol | |
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| ID | 6090370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 103992 |
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| End bp | 105011 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595149 |
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| Product | dipeptide transporter permease DppB |
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| Protein accession | YP_001718855 |
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| Protein GI | 170022350 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.297234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGT TCATACTCCG ACGTTTGGGG TTAGTTATCC CAACGTTTAT CGGCATTACT
TTGCTGACCT TTGCTTTTGT CCATATGATC CCCGGTGACC CGGTGACCAT CATGGCGGGG
GAACGCGGTA TCTCTGCCGA GCGTCATGCT CAAGTCATGG CGGAAATGGG GCTGGACAAG
CCTCTCTATC AACAATATTT CCGCTATGTA AATGGCGTTT TACATGGTGA CCTTGGCATT
TCGCTGAAAA GCCGTATTGC GGTATGGGAT GAGTTTGTCC CGCGCTTTAA AGCAACACTG
GAACTGGGGA TCTGCGCGAT GCTGTTTGCT ATCGCAGTCG GCATTCCGGT TGGTGTGCTG
GCAGCAGTGA AACGCGGTTC AATATTTGAT CACACCGCCG TGGGGATCTC CCTTACCGGC
TATTCGATGC CTATCTTCTG GTGGGGCATC ATGCTGATCA TGCTGGTCTC GGTGCAATGG
GACCTGACCC CGGTTTCCGG GCGTGTCAGC GATACCGTGT TCCTTGATGA CAGCCTGCCT
CTGACGGGGT TTATGTTGAT TGATACCCTC ATCTGGGGGG AACCTGACGA TTTTAAAGAT
GCGGTAATGC ATATGATTTT ACCGGCAATC GTCTTGGGGA CTATTCCCTT GGCGGTGATC
GTGCGTATGA CTCGTTCCTC CATGTTGGAA GTGTTGGGGG AGGATTATAT CCGTACTGCG
CGGGCCAAAG GGCTGAGCCG CATGCGGGTG ATTGTGGTCC ATGCGTTACG CAATGCCTTG
CTGCCTGTCA TCACGGTGAT TGGTTTGCAG GTTGGTACCA TGCTGGCTGG GGCTATCTTG
ACGGAAACCA TCTTCTCGTG GCCGGGTCTG GGTCGTTGGC TGATGGATGC ATTGCAACGC
CGTGATTACC CTGTGGTGCA GGGGGGCGTG TTGCTGGTCG CGATCATGAT TATTTTAGTT
AACTTGCTGG TAGATGTGCT CTATGGCGTA GTTAACCCGC GTATTCGTCA CAAGAAATAA
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| Protein sequence | MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVTIMAG ERGISAERHA QVMAEMGLDK
PLYQQYFRYV NGVLHGDLGI SLKSRIAVWD EFVPRFKATL ELGICAMLFA IAVGIPVGVL
AAVKRGSIFD HTAVGISLTG YSMPIFWWGI MLIMLVSVQW DLTPVSGRVS DTVFLDDSLP
LTGFMLIDTL IWGEPDDFKD AVMHMILPAI VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA
RAKGLSRMRV IVVHALRNAL LPVITVIGLQ VGTMLAGAIL TETIFSWPGL GRWLMDALQR
RDYPVVQGGV LLVAIMIILV NLLVDVLYGV VNPRIRHKK
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