Gene YPK_0081 details

Gene Information

• Locus tag: YPK_0081
• ID: 6087210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 94122
• End bp: 94712
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641595141
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_001718848
• Protein GI: 170022343
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTACC GTGTTGTATT TATTGATGAT CATGACATTG TGCGCTCGGG TTTTGCACAG 
CTACTCTCGC TGGAGGAGGA TATCCAGGTT GTTGGTGAGT TTAGCTCAGC CAAGCAGGCT 
CGTGCTGGGT TGCCGGGCTT ACAGGCGAAT ATCTGTATTT GTGATATTTC CATGCCTGAT 
GAGAACGGAT TAGATTTATT AAAAGGGTTA CCTTCAGGGA TGGGGGTCAT CATGCTCTCT 
ATGCATGACA GTCCTGCGTT GGTAGAAACG GCGCTGGAGC GTGGAGCACG CGGCTTTCTT 
TCTAAACGCT GTAAGCCCGA AGACCTGATC TCTGCCGTCC GAACGGTAGG CAGCGGCGGG 
GTGTATCTGA TGCCTGAAAT TGCCCAACAA TTGGCACGGG TTGCTGTCGA TCCATTGACC 
CGCCGTGAGC GAGAGGTTGC AGTGCTGTTG GCCGAAGGCA TGGAAGTACG CGAGATTGCC 
GAGTCGCTCG GGCTATCGCC AAAAACGGTC CATGTGCACC GGGCTAATTT ATTTGCCAAG 
TTGGGCATCA GCAATAATGT TGAGCTGGCT AAGAAAGTAC TGAACCTATG A 

 

Protein sequence

MTYRVVFIDD HDIVRSGFAQ LLSLEEDIQV VGEFSSAKQA RAGLPGLQAN ICICDISMPD 
ENGLDLLKGL PSGMGVIMLS MHDSPALVET ALERGARGFL SKRCKPEDLI SAVRTVGSGG 
VYLMPEIAQQ LARVAVDPLT RREREVAVLL AEGMEVREIA ESLGLSPKTV HVHRANLFAK 
LGISNNVELA KKVLNL