Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0071 |
Symbol | |
ID | 6090716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 79557 |
End bp | 80510 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641595131 |
Product | periplasmic binding protein |
Protein accession | YP_001718838 |
Protein GI | 170022333 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTAC GTTTAGCTTT ATTTTCGTCA TTACTGGCGG CAACCTTTGC GATAACAGGC TGTGATCAAT CGTCAGAAAC CCCTGACAAT GCAGCAACAA TCAGTATTGA ACATGCACAG GGAACAACGC TGGTTCCGCT AAACCCACAA AAAGTCGTCA TACTGAACCC ATCAGTGCTG GATAACGCTG ACGCCCTACA CATCAAGGTA GCCGGTGTTC CACAGACCAG CACACATCTA CCAGCCTTTT TATCTAAGTA CAGCGGCCCT GAGTATATGA ATACCGGGAC ACTGTTTGAA CCCGATTATG AAGCACTCAG TCAGGCTAAA CCTGACCTGA TCATCGCGGG TGGGCGTGCT CAAGATGCTT ATAACAAACT CAGTGCTATC GCTCCAACTA TCGCGCTTGA TGTTGATACT CAGCACTTTA CCCAGAGCCT TACCCAGCGT ACTGAGCAAC TGGCCTCAAT ATTTGGCAAA GAAGAAGAAG CCAAAACACT GCTTGGTAAT TTCTCATCAC AGGTAAACGC GATAAAGCAG AAATCGGCTA ACGCTGGCTC GGCAATGGTA TTGATGATCA GCGGTGGAAA AATGTCGGCT TACACCCCCG GTTCCCGTTT TGGTTTTATT TTTGACGAAC TGGGGTTCAC ACCTGCGGCC ACCTTTGCTG AATCAGGCCG CCACGGAAAT GTGGTGACAT CAGAATTCAT TCTTAATGCT AATCCTGACT GGCTGTTCGT CCTTGACCGC GACAATGCGA TTGGCCGGAC TGAAGGGCAA TCCGCACAAC AGGTCCTCGA TAACCCGCTG ATCCATAAAA CTAAAGCATG GCAAAACGAT CGCATTGTTT ATCTCGATTC TGCCTCACTC TATATTGCCG GGGGTGTGCA AAGTTATACA CAACTGATGA ATAAGGTGAG CGCAATACTG GATAAGCCAG TATCAGAGCA GTAA
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Protein sequence | MRLRLALFSS LLAATFAITG CDQSSETPDN AATISIEHAQ GTTLVPLNPQ KVVILNPSVL DNADALHIKV AGVPQTSTHL PAFLSKYSGP EYMNTGTLFE PDYEALSQAK PDLIIAGGRA QDAYNKLSAI APTIALDVDT QHFTQSLTQR TEQLASIFGK EEEAKTLLGN FSSQVNAIKQ KSANAGSAMV LMISGGKMSA YTPGSRFGFI FDELGFTPAA TFAESGRHGN VVTSEFILNA NPDWLFVLDR DNAIGRTEGQ SAQQVLDNPL IHKTKAWQND RIVYLDSASL YIAGGVQSYT QLMNKVSAIL DKPVSEQ
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