| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0067 |
|---|
| Symbol | |
|---|
| ID | 6090606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 75893 |
|---|
| End bp | 76648 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641595127 |
|---|
| Product | integrase catalytic region |
|---|
| Protein accession | YP_001718834 |
|---|
| Protein GI | 170022329 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA GCCGCACTGT ATACAACTAT CGTAGCCATC GTGACGATCG GGCTATTACT
CAGCGAATAC GGGAAATTGC GGAGACGCGC ATCCGTTATG GCTGTCCGCG CATTCATATC
CTGCTGCGGA GAGAAGGCTG GCTTGTTAAC CATAAGAAAA CGCACCGTAT TTACTGTCTT
GAGGGTCTCA ATCTACGTTC GAAACGTCCA CGGCGGCATG TGACAGCGAA GCACAGGCAC
GCACGTCCAG AAGTGACCGC GTTAGAGCAG TGCTGGAGCA TGGATTTCGT TGCTGATAAT
CTGTTCAACG GGCGTCGGGT CAGGGCGCTA ACTATAGTGG ATAATTTTAG TCGTGAATGT
CTGGCGATCG AGGTCGGTCA GGGGTTACGT GGAGATGATG TTGTGGCTGT CATGGACAGA
TTAAAACATT CGCTGGGGCG TATTCCACAA AGGCTGCAGA CAGATAACGG CAGCGAATTC
ATCTCGAAGT CGATGGACCG ATGGGCGTAT GAAAACAGGG TCACGATGGA CTTTTCACGC
CCCGGAAAGC CTACAGATAA TGCCTTTATC GAGTCATTTA ATGGCAGTCT GAGGGATGAA
TGTCTGAACG TGCACGGGTT CCTTTCTCTG GAAGATGCTC AGGAGAAAAT TGAACAATGG
CGGCAAGAAT ATAATCATTT TCGTCCGCAT TCTTCGTTAA ATAACCTGGC TCCGGCAGAA
TTTGCCCGAA GTCATCAAAA AGGTCCGGAT CTCTGA
|
|---|
| Protein sequence | MMQSRTVYNY RSHRDDRAIT QRIREIAETR IRYGCPRIHI LLRREGWLVN HKKTHRIYCL
EGLNLRSKRP RRHVTAKHRH ARPEVTALEQ CWSMDFVADN LFNGRRVRAL TIVDNFSREC
LAIEVGQGLR GDDVVAVMDR LKHSLGRIPQ RLQTDNGSEF ISKSMDRWAY ENRVTMDFSR
PGKPTDNAFI ESFNGSLRDE CLNVHGFLSL EDAQEKIEQW RQEYNHFRPH SSLNNLAPAE
FARSHQKGPD L
|
|---|
| |