| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0052 |
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| Symbol | |
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| ID | 6091191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 56288 |
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| End bp | 58786 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641595111 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001718819 |
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| Protein GI | 170022314 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATATA ATTCTAAAAG AAAAAAAACC ATCTTCCTAA TGGTGAAAGT ATTAACAATA
ATTTTAGTAT GGTTATTTTT GCCTGAATCG ACTGCAGTAG TAAAATTCAA TACCAATATT
ATCGATGCTA AAGACCGTAG TAATATCGAT CTCTCTCGTT TTGAGGTTGA TGATTACACC
CCTCCGGGGA ATTATCTCCT TGATATTCTT ATTGATGATA GGCTGTTACC TGAACGTTAT
TTAGTGACTT ATCTCGCTGT TGATGAAGGG AAATCAACGA AGCTCTGTTT GACGCCTGAC
TTAGTTAATC TATTTGGTTT ATCTACGGAA GTACGTGAGT CGATGACATT ATGGAATAAC
GACAAGTGTG TTGCTATTGA TGAAAAAAAA GAGATAAAAA TTCAGTACGA TAAAGAGAAG
CAATACTTAA TTATTTCTAT TCCCCAAGCT TGGCTGGCTT ATAACGATCC CAATTGGGTG
CCGCCTTCAC AATGGGGAAA CGGTGTTGCT GGTACTTTAT TGGATTACAA TTTGTTTGGT
TATCATTATT CACCGAATAT GGGCGGCAGT ACCACAAATT TCAGCAGCTA CGGCACTACC
GGGGCTAATA TGGGACCATG GCGTATTCGT GCAGATTACC AATATATCAA TACAGAAACG
GCGGGCGAGC ACTACCGTAA TTTTGATTGG TCGCAAGTGT ATGCTTTTCG AGCCATCCCC
TCGATAGGGG CTAAATTTGT CGGTGGCCAG ACTTATCTCA ACTCCAGTAT TTTTGATTCA
TTCCGTTTTC TGGGCACTTC ACTTTCCAGT GATGAGCGCA TGTTGCCACC GACGTTACGC
GGCTATGCAC CACAGGTAAT GGGCATTGCT CACACCAACG CCCGCGTGGT ATTGAGCCAG
AATGGGCGGG TGCTTTATCA GACTAACGTT GCACCAGGCC CCTTTGTTAT TCAAGACATT
AGCGAAGCCG TACAAGGGAA TATTGATGTC CGCGTGGAAG AGGAAGATGG CCGGGTCACC
GTGTTTCAAG TCAACGCCGC GAGCGTGCCA TTTTTAACCC GTAAAGGTGC CGTGCGCTAT
AAAGCTGCGT TGGGTCGCCC GATGCTGGGG GGAAATAATT CAGCCAGTAA TCCGACATTC
TTTAGCGGCG AATTCTCGTG GGGCGCATTT AACCATGTTT CATTATACGG TGGGCTGATG
ACGACTTCGC AGGATTACAC CTCGGCTGCG TTGGGCATCG GGCAAAATTT ATATGACTTC
GGCGCACTGT CTATTGATAT CACCCATTCC CGTGCGCAGT TACCAAATGA AGAACAGCAG
AACGGGGAAA GCTATCGCGT TAATTATTCC AAACGTTTTG AGCAGACTGA CAGCCAGATT
AGCTTTGCCG GATACCGTTT CTCGAAGAAG AATTTTATGA GTATGAGCCA GTATTTGGAT
TGGCTAAACG GCAATACTGC TCTGCAATAT GACAAGCAGG CTTATACCGT GGCAGCTAAC
CAGTATCTGG CCTGGCCGGA TATCACGATG TATTTATCGG TGACACGTAG AACCTATTGG
AATGCGGCCT CCAGTAACAA CTACAGTCTA TCCATGAGCA AGATTTTTGA TATCGGTACT
TTTAAGGGCA TTTCGGCGAC GATATCCGCT AATAAGGTGA ATAATCAGTA TGCCAATGAG
AATCAAATGT TCTTCTCACT CAGCGTACCG ATCGGCATAG GCCAGCAGGC CAGCTATGAT
GCACAGCGAG GCCGCAATAC CGGCTACACG CAAAATATCT CCTATTTCAA CAACCAGAAT
CCGAAAAATA TTTGGCGTAT CAGCGCGGGT GGCGGTAACC CAGAACTGCA AAAAGGTAAT
GGTGTGTTCC GTGGTGGTTA TCAACATAGC TCGCCTTATG GTGAATTTGG TCTTGATGGT
AGCCATAAAA ATAATGAGTA CAACTCAATC AATACCAACT GGTATGGCTC AATTACGGCA
ACCGCTTATG GGGTTGCTGC CCACCAGAAT AAAGCGGGCA ATGAACCAAG AATAATGGTT
GATACCGGGG ATGTCGCAGG GGTGTCGCTG AATAATAACT CGGCAGTGAC GAACCGTTTT
GGTGTGGCGG TGGTCAGTGG CGCAACCAGC TACCAACAGT CTGATATTCG GGTGGATGTG
CAGAATCTGC CGGATGATAT TGAGGTCTAC AACACCGTTA TCCAAAAAAC GCTGACCGAA
GGGGCAATTG GTTACCGTGA GATAAGGGCG GTAAAAGGTC GGCAAATGAT GGCGATTATT
CGCCTGAAAG ATGGCAGTTC CCCCCCCTTG GGGGCATCCG TTATCACGGA CAAAACGGGC
GCTGAAGTTG GAATTGTGGG AGACGATGGC CTGACGTATT TGGCGGGATT ACAAGACACT
GAGAGGCTGA CTGTTCAATG GGGGAAAAAA CAGTGCACGC TCATATTGCC AAAAGATAAA
GGAATGAACT CAGGAAAGGT ACTACTGCCC TGCCAGTAA
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| Protein sequence | MPYNSKRKKT IFLMVKVLTI ILVWLFLPES TAVVKFNTNI IDAKDRSNID LSRFEVDDYT
PPGNYLLDIL IDDRLLPERY LVTYLAVDEG KSTKLCLTPD LVNLFGLSTE VRESMTLWNN
DKCVAIDEKK EIKIQYDKEK QYLIISIPQA WLAYNDPNWV PPSQWGNGVA GTLLDYNLFG
YHYSPNMGGS TTNFSSYGTT GANMGPWRIR ADYQYINTET AGEHYRNFDW SQVYAFRAIP
SIGAKFVGGQ TYLNSSIFDS FRFLGTSLSS DERMLPPTLR GYAPQVMGIA HTNARVVLSQ
NGRVLYQTNV APGPFVIQDI SEAVQGNIDV RVEEEDGRVT VFQVNAASVP FLTRKGAVRY
KAALGRPMLG GNNSASNPTF FSGEFSWGAF NHVSLYGGLM TTSQDYTSAA LGIGQNLYDF
GALSIDITHS RAQLPNEEQQ NGESYRVNYS KRFEQTDSQI SFAGYRFSKK NFMSMSQYLD
WLNGNTALQY DKQAYTVAAN QYLAWPDITM YLSVTRRTYW NAASSNNYSL SMSKIFDIGT
FKGISATISA NKVNNQYANE NQMFFSLSVP IGIGQQASYD AQRGRNTGYT QNISYFNNQN
PKNIWRISAG GGNPELQKGN GVFRGGYQHS SPYGEFGLDG SHKNNEYNSI NTNWYGSITA
TAYGVAAHQN KAGNEPRIMV DTGDVAGVSL NNNSAVTNRF GVAVVSGATS YQQSDIRVDV
QNLPDDIEVY NTVIQKTLTE GAIGYREIRA VKGRQMMAII RLKDGSSPPL GASVITDKTG
AEVGIVGDDG LTYLAGLQDT ERLTVQWGKK QCTLILPKDK GMNSGKVLLP CQ
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