| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0038 |
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| Symbol | |
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| ID | 6090610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 40846 |
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| End bp | 43257 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595097 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001718805 |
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| Protein GI | 170022300 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC ACTGGGTTGA CATTAAGAAC GCGGATTTAA TTATCGTCAT GGGCGGTAAT
GCGGCAGAAG CGCATCCGGT GGGGTTCCGC TGGGCGATGG AAGCCAAAAT CCACAACAAT
GCCAAGCTTC TGGTGATAGA TCCGCGCTTT ACTCGTACGG CATCGGTGGC TGATTTCTAT
ACGCCAATCC GCTCCGGTAC GGATATTGCG TTTCTGTCCG GTGTCTTGTT GTACCTGATC
TCCAACAATA AAATTAACCG TGAATATGTC GAAGCCTATA CCAACGCCAG CTTGCTGGTG
CGGGAAGACT ATGCTTTCGA TGATGGCCTG TTCAGTGGCT ATGACGCCGA AAACCGTAAA
TACGATAAAA CCAGCTGGAA CTATCAGTTG GATGAAGACG GTTTTGCTAA ACGGGATGTC
ACGCTGCAAC ACCCGCGTTG TGTGTGGAAC CTGCTGAAAG AGCACGTTAG CCGCTATACA
CCGGAAGTGG TCTCCAATAT TTGCGGTACG CCAAAAGACG ATTTCCTGCA GGTTTGTGAA
TATCTCGCCG AAACCAGTGT ATCCAATAAA ACGGCGACGT TCCTGTATGC CTTGGGTTGG
ACGCAGCACT CTGTGGGTGC GCAGAATATC CGTACTATGG CGATGATCCA GTTGCTGTTG
GGCAACATGG GGATGGCAGG TGGCGGTATT AACGCCCTAC GCGGTCACTC CAATATCCAA
GGGCTGACTG ACCTTGGCCT GTTGTCGCAA AGCCTGCCGG GTTACTTGAA CTTGCCGTCA
GAAAAACAGC CGGATATTGA TACCTACCTG AAGGCCAACA CGCCGAAAAC CCTGTTACCA
GGCCAGGTTA ACTACTGGAG TAATTACCCG AAATTCTTTG TCAGTTTGAT GAAAAGTTTC
TACGGTGATA ACGCCCAAAA GGAAAATGGC TGGGGCTATG ACTGGCTGCC GAAGTGGGAT
AAAGGCTACG ACGTCTTGCA GTATTTCGAA ATGATGTCGC AGGGCAAGGT CAATGGCTAT
CTGTGCCAAG GCTTTAACCC GATTGCCTCG TTCCCGGATA AAAACAAAGT GACAGCGGCG
CTGTCGAAGC TGAAATTCTT GGTGACGATT GATCCACTCA ATACTGAAAC CGCGAATTTC
TGGCAAAACC ACGGTGAATT TAACGATGTC GATCCATCGA AAATTCAAAC TGAGGTGTTC
CGCTTGCCAT CCAGTTGTTT TGCTGAAGAG AACGGCTCGA TCGTTAACTC CAGCCGCTGG
CTGCAATGGC ACTGGAAAGG CGCTGATTCA CCGGGAGAAG CACTGAACGA TGGTGCAATT
CTGGCGGGCA TCTTTATGCG TATGCGTGAG ATGTACCAGC GGGAAGGTGG CGCGGTGCCT
GAGCAGGTGC TCAATATGAC CTGGGACTAC CTGACACCAG AAAATCCAGA GCCGGAAGAA
GTGGCAATGG AAAGTAATGG GCGAGCGCTG GCGGATCTCA CTGATGCCGA CGGCAAAGTG
TTGGTCAAAA AAGGCGAACA GCTCAGTACC TTCGCTCAAC TGCGTGATGA CGGTACCACT
TCCAGTGGTT GCTGGATCTT TGCGGGTAGC TGGACACCGG CCGGTAACCA AATGGCGCGG
CGTGATAATG CGGATCCATC GGGTCTCGGC AATACCTTGG GCTGGGCCTG GGCATGGCCG
CTTAACCGCC GCATTCTGTA CAACCGTGCG TCTGCTGACC CGCAGGGTAA ACCGTGGGAT
CCGAAACGCC AGTTGCTGGA GTGGGATGGT GCTAAGTGGG CCGGTATTGA TGTTGCTGAC
TACAGTGCTG CGGCACCGGG CAGTGATGTT GGGCCGTTTA TCATGCAGCC TGAAGGGATG
GGCCGTTTGT TTGCAATCGA TAAGATGGCT GAAGGGCCGT TCCCTGAGCA TTATGAGCCA
TTTGAAACGC CGTTGGGGAC CAACCCGCTG CATCCGAATG TGATCTCTAA CCCAGCCGCT
CGTGTATTTA AAGATGATCT GGCCGCGATG GGGTCGCACG AGCAATTCCC TTATGTTGGC
ACCACTTATC GTTTAACCGA ACATTTCCAC TACTGGACCA AACATGCGTT GCTCAATGCC
ATCGCTCAAC CGGAACAGTT TGTGGAAATT GGCGAAAAAC TGGCGGCGAA GAAAGGGATT
AAGCAAGGCG ATACGGTGAA AGTCAGCTCT AACCGTGGCT TTATCAAAGC CAAGGCGGTG
GTGACTAAAC GTATTCGTAC TCTGAATGTT CATGGGCAAG AAGTTGACAC CATTGGTATT
CCGATCCATT GGGGATACGA AGGGGTGGCA AAAAAAGGCT TCCTGGCGAA TACCCTGACA
CCGTATGTCG GTGATGCCAA TACGCAAACG CCAGAGTTCA AGGCGTTTCT GGTCAATGTG
GAAAAGGTGT AA
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| Protein sequence | MTNHWVDIKN ADLIIVMGGN AAEAHPVGFR WAMEAKIHNN AKLLVIDPRF TRTASVADFY
TPIRSGTDIA FLSGVLLYLI SNNKINREYV EAYTNASLLV REDYAFDDGL FSGYDAENRK
YDKTSWNYQL DEDGFAKRDV TLQHPRCVWN LLKEHVSRYT PEVVSNICGT PKDDFLQVCE
YLAETSVSNK TATFLYALGW TQHSVGAQNI RTMAMIQLLL GNMGMAGGGI NALRGHSNIQ
GLTDLGLLSQ SLPGYLNLPS EKQPDIDTYL KANTPKTLLP GQVNYWSNYP KFFVSLMKSF
YGDNAQKENG WGYDWLPKWD KGYDVLQYFE MMSQGKVNGY LCQGFNPIAS FPDKNKVTAA
LSKLKFLVTI DPLNTETANF WQNHGEFNDV DPSKIQTEVF RLPSSCFAEE NGSIVNSSRW
LQWHWKGADS PGEALNDGAI LAGIFMRMRE MYQREGGAVP EQVLNMTWDY LTPENPEPEE
VAMESNGRAL ADLTDADGKV LVKKGEQLST FAQLRDDGTT SSGCWIFAGS WTPAGNQMAR
RDNADPSGLG NTLGWAWAWP LNRRILYNRA SADPQGKPWD PKRQLLEWDG AKWAGIDVAD
YSAAAPGSDV GPFIMQPEGM GRLFAIDKMA EGPFPEHYEP FETPLGTNPL HPNVISNPAA
RVFKDDLAAM GSHEQFPYVG TTYRLTEHFH YWTKHALLNA IAQPEQFVEI GEKLAAKKGI
KQGDTVKVSS NRGFIKAKAV VTKRIRTLNV HGQEVDTIGI PIHWGYEGVA KKGFLANTLT
PYVGDANTQT PEFKAFLVNV EKV
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