| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0026 |
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| Symbol | |
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| ID | 6087386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 29548 |
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| End bp | 31479 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641595085 |
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| Product | PTS system, mannitol-specific IIC subunit |
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| Protein accession | YP_001718793 |
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| Protein GI | 170022288 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain |
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| TIGRFAM ID | [TIGR00851] PTS system, mannitol-specific IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTCAC CAGACGCAAA GGTCAGGGTC CAAAACTTTG GCCGATTCCT AAGCAATATG
GTCATGCCCA ATATCGGCGC ATTTATCGCT TGGGGCATTA TCACCGCACT GTTTATTCCA
ACCGGCTGGC TGCCCAATGA AACCTTAGCC AAACTGGTTG GCCCGATGAT TACCTATCTG
TTGCCACTGT TGATCGGTTT TACCGGTGGC CGTTTGGTAG GCGGAGATCG CGGTGGTGTA
GTCGGTGCCA TCACCACCAT GGGGGTGATC GTTGGTGCGG ATATGCCAAT GTTCCTCGGT
GCGATGATTG TCGGCCCGCT GGGTGGCTGG GCAATTAAAC ATTTTGACCG CTGGGTTGAA
GGTAAAATCA AAAGCGGCTT TGAGATGTTG GTTAACAACT TCTCATCCGG CATCATTGGT
ATGTTGCTGG CTCTCCTGGC CTTTATGGCG ATTGGTCCGT TGGTTGAAGT CCTGTCTAAA
GGGCTGGCTT ACGGTGTGGA TGTCATGGTG CAGAATAATC TGTTGCCACT CGCATCGATC
TTCGTTGAAC CGGCAAAAAT TCTCTTCCTG AATAACGCTA TCAACCACGG TATCTTCTCA
CCACTGGGTG TCCAGCAAGC CGCTGAAACC GGTAAGTCTA TCTTCTTCTT GATCGAAGCA
AACCCAGGAC CGGGGTTGGG TGTGTTGATG GCGTATATGT TCTTCGGCAA AGGTAATGCT
AAGCAGTCAG CTGGCGGTGC CGCTATCATC CATTTCTTCG GTGGTATCCA CGAAATTTAT
TTCCCTTATG TGCTGATGAA CCCTCGCTTA CTGTTGGCGG TGATTCTGGG CGGTATGACA
GGTGTGTTCA CCCTGACCCT GCTGAACGGC GGGCTGGTCT CTGCCGCTTC ACCGGGTTCT
ATTCTGGCAA TATTGGCCAT GACGCCTAAA GGGGCTTACT TTGCCAACAT TGCTGCGGTT
GCCACCGCCT TTGCCGTGTC CTTCGTGGTC TCTGCCATCT TGCTGAAAAG CTCTAAGGCT
AAAGACGATG AAGAGGGCCT TGAAGGCGCA ACTCGCCGTA TGCAAGATAT GAAAGCGCAG
TCTAAAGGTG TTCAGGCGGC CAATGCCGCT GCCGCTGCTG GCGATTTAAG CACAGTGCGT
AAAATTATCG TTGCCTGTGA TGCCGGTATG GGGTCCAGTG CGATGGGGGC TGGTGTTCTG
CGTAAAAAAG TACAAGATGC CGGGCTGAAA CATATTGCGG TGACCAACTG TGCAATCAAC
AACTTACCGG AAGATGTGGA TCTGGTGATC ACGCACCGTG ATTTGACTGA GCGGGCGATG
CGCCATGCAC CGCAGGCACA GCATATCTCG CTGACTAATT TCCTCGACAG CCAACTGTAC
AACAGCCTGA CGGCGGAGCT GCTGCAAGCC AGTCAATTGG TTGATAATAC TAAAGTACAG
AAAGTGATCG AAAAACTGGA CGATAGCTTC GAAGCATTTG AAGATAATTT GTTCAAGTTG
GGGGCGGAGA ATATCTTCCT CAATCAGCAT GCGACAGCCA AAGAGCAGGC TATCCGCTTC
GCCGGTGAAC AGTTGGTCAA AGGTGGCTAT GTCGAACCTG AATATGTCGA GGCGATGCTG
GATCGTGAAA AACTGAGCTC AACGTATCTG GGTGAGTCTA TCGCGGTGCC ACATGGCACG
ATTGAAGCAA AAGATCGTGT GCTGAAGACC GGGGTGGTGT TCTGTCAATA CCCGGAAGGT
GTGCGCTTTG GCGATGAAGA AGATGATATC GCCCGTCTGG TGATTGGTAT TGCTGCTCGT
AACAACGAGC ATATTCAAGT CATTACCAGC CTGACTAACG CACTGGATGA CGACTCGGTG
ATTGCGCGTT TAAGTAAGAC GACCAGCGTG CAGGAAGTAT TGGACTTACT GGGCGGTAAA
ACGTCTGCTT GA
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| Protein sequence | MFSPDAKVRV QNFGRFLSNM VMPNIGAFIA WGIITALFIP TGWLPNETLA KLVGPMITYL
LPLLIGFTGG RLVGGDRGGV VGAITTMGVI VGADMPMFLG AMIVGPLGGW AIKHFDRWVE
GKIKSGFEML VNNFSSGIIG MLLALLAFMA IGPLVEVLSK GLAYGVDVMV QNNLLPLASI
FVEPAKILFL NNAINHGIFS PLGVQQAAET GKSIFFLIEA NPGPGLGVLM AYMFFGKGNA
KQSAGGAAII HFFGGIHEIY FPYVLMNPRL LLAVILGGMT GVFTLTLLNG GLVSAASPGS
ILAILAMTPK GAYFANIAAV ATAFAVSFVV SAILLKSSKA KDDEEGLEGA TRRMQDMKAQ
SKGVQAANAA AAAGDLSTVR KIIVACDAGM GSSAMGAGVL RKKVQDAGLK HIAVTNCAIN
NLPEDVDLVI THRDLTERAM RHAPQAQHIS LTNFLDSQLY NSLTAELLQA SQLVDNTKVQ
KVIEKLDDSF EAFEDNLFKL GAENIFLNQH ATAKEQAIRF AGEQLVKGGY VEPEYVEAML
DREKLSSTYL GESIAVPHGT IEAKDRVLKT GVVFCQYPEG VRFGDEEDDI ARLVIGIAAR
NNEHIQVITS LTNALDDDSV IARLSKTTSV QEVLDLLGGK TSA
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