Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0017 |
Symbol | |
ID | 6090481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 20183 |
End bp | 21163 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641595076 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001718784 |
Protein GI | 170022279 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTT CTATTGTGTT GTACAAAAGT ATTCCCACCG ATCTGCATCA GCGTTTAGCA CAACATTTTA CCGTAAACAG TTTTGATGGC TTAACACCGG ATAATCAGCC GGAGCTATTA GCTGCCCTAC AACAAGCGGA AGGATTAATT GGTTCTGGCG GTAAAATCGA TCAAGACTTT TTACAATTAG CGCCAAATTT ACGGGCTGCC TCCACCATTT CTGTCGGTTA TGACAATTTC GATGTTGAAG CCCTGAGTCA ACGGGGCATT GCACTGATGC ACACGCCCAC CGTGCTAACA GAGACCGTGG CCGATACCAT GATGGCGCTC ATGTTGTCTA CGGCGCGTCG GGTGGTTGAA CTGGCGGAGC GGGTGAAAGC CGGTGAATGG CAAGAGAGCA TTGGTGATGA CTGGTTCGGT GTTGACGTTC ACCATAAAAC CATTGGTATT CTGGGCATGG GCCGTATTGG CATGGCGTTA GCCCAACGGG CACATTTTGG TTTCAGTATG CCCGTGCTGT ACACCAGCCG CCGCCCCCAC GAAGCAGCAG AACAGCGTTT TGGTGCCCGC CACTGCTCAC TGGATACTCT GCTAGCTGAG GCCGATTTCC TGTGTATTAC CTTGCCGATG ACAGAACAGA CTTATCATAT GATTGGCCGT GAACAACTGG CAAAAATAAA ATCCAGTGCC ATTTTGATTA ATGCGGGCCG TGGACCCGTG GTGGATGAAC AGGCGCTGAT TGCAGCCTTA CAAGATGGCA CGATCCACGC CGCGGGGCTG GATGTCTTTG AGCAAGAGCC GCTGCCTGTG GATTCGCCAC TCCTGACGCT ACGTAATGTG GTTGCTGTAC CACACATTGG TTCTGCCACC CATGAAACCC GCTACAACAT GGCGGCTTGT GCAGTTGATA ACCTCATCAA TGCCCTCACC GGCACGGTAA AAGAGAACTG TGTAAACCCA CAGGTGCTAA TAACTCACTA A
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Protein sequence | MKPSIVLYKS IPTDLHQRLA QHFTVNSFDG LTPDNQPELL AALQQAEGLI GSGGKIDQDF LQLAPNLRAA STISVGYDNF DVEALSQRGI ALMHTPTVLT ETVADTMMAL MLSTARRVVE LAERVKAGEW QESIGDDWFG VDVHHKTIGI LGMGRIGMAL AQRAHFGFSM PVLYTSRRPH EAAEQRFGAR HCSLDTLLAE ADFLCITLPM TEQTYHMIGR EQLAKIKSSA ILINAGRGPV VDEQALIAAL QDGTIHAAGL DVFEQEPLPV DSPLLTLRNV VAVPHIGSAT HETRYNMAAC AVDNLINALT GTVKENCVNP QVLITH
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