| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0016 |
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| Symbol | malS |
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| ID | 6090791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 17850 |
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| End bp | 19913 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595075 |
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| Product | periplasmic alpha-amylase precursor |
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| Protein accession | YP_001718783 |
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| Protein GI | 170022278 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.24938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC TCACACTCCC CTTGCTACTG GTTCTTTCAC CAACAGCGAT GGCGAACTGG
TCCCTACAGC ATTTTCCGGC TTTTACTGAA CAGGACAGCG GTATTTTTCT CAGTAGCAGC
TCACTGACCA AAGGCGAATA CCCTCTAAAA TTTTATCAGG ATAAACAGTG CTGGCAGCCA
ACCGGGCCGG TAAAGCTGAA CCAAATGCTC TCGTTGCAGC CTTGCCAGGA GAATATCGCG
ATACCGTGGC GGTTGTTCCG TGATGGCCAG TATCAAGCGC GAATCGATAC CCGTAGCGGC
ACCCCGACGC TGACCTTAAG TGTCACCGCA CCCGTAGCGG AGGCAGTCCA GGTCGTCACC
CACGTTTGCC AACGCTGGGA TGGCAATCCT GTGACCGTGG ATGTCAGTAA AACCTTTGCC
GAAGGTGAAA TTGTACGGGA TTTCTATTCC GGCCAAACGG CAACCGTTTC TCTCGGCAAA
ATTACGTTAC GACCCGCCCC AGAGAGTGGT GGTTTACTGC TGTTGGAATC GGCCCAAACA
CAGCAAGCCG CGCCTTTTAG CTGGCAAAAC GCTACGGTCT ATTTTGCCCT GACCGACAGA
TTTAATAACG GCAACCCAGC GAACGACCAT AGCTATGGCC GTCATGGCGA TGGGATGCAG
GAGATAGGAA CGTTTCACGG TGGCGATTTG GCGGGGCTTA CCGAGAAGCT GGATTATCTG
CAACAGCTTG GGGTCAACGC ACTGTGGATC AGTTCTCCAC TGGAACAAAT TCACGGCTGG
GTCGGCGGGG GGACCAAAGG CGACTTCCCA CATTATGCCT ATCATGGCTA CTACGGGCTG
GACTGGACCC GTCTGGATGC CAATATGGGC ACCGAACAGG ATTTACGCAC ACTGGTTGAA
CAGGCACATA AACGCGGCAT TCGCATCCTA TTTGATGTGG TGATGAATCA TGTGGGTTAT
GCAACGCTGG CGGATATGCA GAACGACCAA TTCGGGGCGC TCTACCTGCA AGGCGATCAG
CAGGAAAAAA CCTTGGGTAA GCGTTGGAGC GACTGGACCC CTGGCAGCGG GCAGACCTGG
CACAGCTTTA ATGATTACAT CAACTTCAGT GATAAGACCG CTTGGGATAA TTGGTGGGGT
AAAAAGTGGA TCCGCACCGA TATTGGTGAT TACGACACCC CCGGTTATGA CGATCTGACG
ATGTCGCTGG CCTTCCTACC CGATATCAAA ACAGAATCGA CGCAGCCCAG CGGTTTGCCA
GTGTTTTACC GTAACAAACC GGACACCGCA GCCCAAGAAA TCGCCGGTGC GACACCCCGT
GATTATATGA CGCATTGGTT AAGCCAATGG GTACGCGATT ACGGCATTGA CGGTTTTCGG
GTTGATACTG CCAAGCATGT AGAGAAACCC GCCTGGCAAC AATTAAAGCA GCAGAGCATC
GCGGCACTGG CCGAATGGAA AGCCGCACAT CCAGAACAGG CGCTGGATAA TCTGCCATTT
TGGATGACCG GAGAGGCTTG GGGCCACGGT GTCATGAAAA GTGATTACTA CCAAAATGGC
TTTGATGCCA TGATTAATTT TGATTTTCAG GATCAGGCAA ATCAGGCGCT GGCCTGCTTC
TCATCTATCG AGAGTACCTA CAACCAAATG GCGGAGAAAC TGCAAAACTT CAATGTGTTG
AGCTACCTCT CGTCTCACGA TACCCGGTTA TTCTTTAAAG ACGATGCACA ACAGTCACTG
GCAAAACAGC AGCGAGCAGG CTCTTTACTG TTGTTGGCTC CGGGGGCAGT ACAAATCTTC
TACGGTGATG AAAGCGGGCG GAAGTTTGGC CCAACCGGTT CCGATCCGTT GCAGGGTACC
CGTTCGGATA TGAACTGGAG TGAGCTATCG GGCGAAAAAG GCGCACTGTT GGCCCATTGG
CAAAAAGTCA GTCAATTCCG CGCCCGTCAT CCCGCGATAG GCGCTGGTGT ACAACAATCG
CAACAAACCG CCAATTACTA TGCCTTTAGC CGCCAACATC AGGGCGATAA GGTTCTGGTC
GTTTGGGTCG GTGATAAGAA CTGA
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| Protein sequence | MKRLTLPLLL VLSPTAMANW SLQHFPAFTE QDSGIFLSSS SLTKGEYPLK FYQDKQCWQP
TGPVKLNQML SLQPCQENIA IPWRLFRDGQ YQARIDTRSG TPTLTLSVTA PVAEAVQVVT
HVCQRWDGNP VTVDVSKTFA EGEIVRDFYS GQTATVSLGK ITLRPAPESG GLLLLESAQT
QQAAPFSWQN ATVYFALTDR FNNGNPANDH SYGRHGDGMQ EIGTFHGGDL AGLTEKLDYL
QQLGVNALWI SSPLEQIHGW VGGGTKGDFP HYAYHGYYGL DWTRLDANMG TEQDLRTLVE
QAHKRGIRIL FDVVMNHVGY ATLADMQNDQ FGALYLQGDQ QEKTLGKRWS DWTPGSGQTW
HSFNDYINFS DKTAWDNWWG KKWIRTDIGD YDTPGYDDLT MSLAFLPDIK TESTQPSGLP
VFYRNKPDTA AQEIAGATPR DYMTHWLSQW VRDYGIDGFR VDTAKHVEKP AWQQLKQQSI
AALAEWKAAH PEQALDNLPF WMTGEAWGHG VMKSDYYQNG FDAMINFDFQ DQANQALACF
SSIESTYNQM AEKLQNFNVL SYLSSHDTRL FFKDDAQQSL AKQQRAGSLL LLAPGAVQIF
YGDESGRKFG PTGSDPLQGT RSDMNWSELS GEKGALLAHW QKVSQFRARH PAIGAGVQQS
QQTANYYAFS RQHQGDKVLV VWVGDKN
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