Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0008 |
Symbol | |
ID | 6090948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 8753 |
End bp | 9715 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641595067 |
Product | hypothetical protein |
Protein accession | YP_001718775 |
Protein GI | 170022270 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGT TGTTTGATGC CATCAGAGAG GCCCACCAGA TATTACGCCC ACAAGTGAGA GTCACGCCGT TGGAGCATAG CCCACTGCTA TCTCAACACA GCGGTTGTGA GATCTATCTT AAATGTGAGC ACCTGCAGCA CACCGGTTCT TTTAAATTTC GTGGGGCCAG TAACAAGTTA CGTTTACTCA ATGAGGCACA ACGCCAGCAA GGTGTGATCA CCGCCTCCAC CGGTAACCAT GGGCAAGGTG TGGCGCTGGC CGCAAAACTG GCGGGGATTA AATCCACTAT TTACGCCCCA GAACAGGCGG CAGCCATCAA GCTGGATGTG ATCCGTGCAC TGGGGGGGCA AATTGAATTA GTCTCCGGAG ATGCCTTAAA TGCTGAACTG GCCGCCGGTA TCGCCGCTGA GCAACAAGGT AAAGTGTATA TCTCACCGTA TAACGACCCG CAGGTCATTG CCGGGCAAGG CACCTGTGGC ATGGAGATGG TCGAACAGCA GCCCGATCTT GATGCGGTGT TTGTTGCCGT TGGTGGTGGT GGCCTGATTT CAGGTATTGC GACCGTATTG AAAACATTAT CGGATAAAAC GCAGGTGATT GGTTGCTGGC CAGCCAATGC CACCAGCCTG TATACCTGTC TGGAGAAAGG ACAGATTCAG GAGGTGGCAG AGCAAGAAAC GCTGTCTGAC GGAACCTCCG GTGGTATCGA ACCGGGAGCG ATCACCTTTG CACTGTGCCA ACAGCTAATC GATCAGAAGG TGCTGGTGAG TGAGCAAGAA ATCAAAGAGG CCATGGGTTT GATTGCCCGT ACTGACCGCT GGATGATTGA AGGTGCCGCC GGTGTAGCAC TGGCTGCGGC ACTGAAATTG GCTCCGCAAT GGCAAGGTAA GAAAGTGGCG GTGGTGTTGT GCGGTAAAAA TATCGTGCTG GAGAAATATC TGGGAGCTGT CAGCGGATGC TAA
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Protein sequence | MNTLFDAIRE AHQILRPQVR VTPLEHSPLL SQHSGCEIYL KCEHLQHTGS FKFRGASNKL RLLNEAQRQQ GVITASTGNH GQGVALAAKL AGIKSTIYAP EQAAAIKLDV IRALGGQIEL VSGDALNAEL AAGIAAEQQG KVYISPYNDP QVIAGQGTCG MEMVEQQPDL DAVFVAVGGG GLISGIATVL KTLSDKTQVI GCWPANATSL YTCLEKGQIQ EVAEQETLSD GTSGGIEPGA ITFALCQQLI DQKVLVSEQE IKEAMGLIAR TDRWMIEGAA GVALAAALKL APQWQGKKVA VVLCGKNIVL EKYLGAVSGC
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