Gene Daud_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2148 
Symbol 
ID6027247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2264630 
End bp2265088 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID641594966 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_001718267 
Protein GI169832285 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAATCG CCATTGCCTG TGACCACGGC GGATTCAAAC TCAAGCAGGA AGTACTGGAC 
TGTTTGAAGG ATAGCGGTTT TCAAGTTCAA GATTGCGGGA CGTTTTCCGA GGCCTCGGTC
GACTACCCGG ACGTGGTGCT GCCGGTGGCC GAGGCCGTAG CCCGGGGGGA GTGGGACCGG
GCCATCCTGT TATGCGGCAC GGGCATCGGG GTGGCGATGG TGGCCAACAA AGTGCCGGGG
GTCCGGGCGG CGGTCGCCCA CGACCCTTAT TCGGCCCGTC ATTCGCGGGC CCACAACGAC
GCGAACGTCC TCGCTCTCGG AGAGCGGGTC GTCGGTCCGG GCTTGGCCCG CGATATCGTG
ACCGTCTGGC TTCAAACCGA ATTCGAGGGC GGCCGGCACG CTCGGCGGGT CGGCAAGATC
GCGGCCGTTG AAGAAAAATA CGCCCCGAGG AGGAGTTAG
 
Protein sequence
MRIAIACDHG GFKLKQEVLD CLKDSGFQVQ DCGTFSEASV DYPDVVLPVA EAVARGEWDR 
AILLCGTGIG VAMVANKVPG VRAAVAHDPY SARHSRAHND ANVLALGERV VGPGLARDIV
TVWLQTEFEG GRHARRVGKI AAVEEKYAPR RS