Gene Daud_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2129 
Symbol 
ID6025699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2246080 
End bp2250066 
Gene Length3987 bp 
Protein Length1328 aa 
Translation table11 
GC content73% 
IMG OID641594947 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001718248 
Protein GI169832266 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGC AAAGGCAACT GTTCGTGCTC GGCGCGCTTG TCGTGCTCAG TGCGTTGCTG 
ATTACGGTTT TTCTGCTCGC GCCGGGGGGC GGCGGGCTCT TCGGCCCGGC GGCCGGCCCG
GAGACCAGAC CCGGCAAAAC CGGCCGCACC GGCCCTCTCA CCGTCCTTGA AACGGTCCCA
CCGCCGGCCT CCGCCGCCGC GGCCGCGGAC GCGGGCCGGC CCGCAGACGG GTCCGGTGGC
GATCCCCTGG TGCTCAACGT CACCCTGTTC CGGGCGGACG CCAAGGACCG GGTGGCGGCC
CTGGTGCACG CGCACGGCGG CACTGTCCTG CGCGGCCTGG ACGAGGAGGA CGGCCGGGTC
CTGCGGGTGA GCCTGTCCAC CCCGCTGCCC GAGGCGCTCG CCGGCAGCCC GGACGTCTTT
TCCCTTGAAC CTTACGAAGC CCCTGTCCTT CTGAACGACC GGGTACGCGC GGTCATCGGG
GCTGATTTTC TCACCGTGCC GGGCTTCGCC ACGCCGTCTG GCCTAACCGG GGCCGGCCAG
ATCGTGGCCG TGGCCGACAG CGGCTTGGAC CGGGGCCGCA CCGACGAGAT CCACCCCGAC
CTCGCCAGCG TCCCGGGCCG CATGCCCAAG GTCGTCCTCC TGCGTTCCTG GTCCGGCGGC
GGCACGGCCG ACCCGGTCGG GCACGGCACC CACGTCGCGG CCACGGTGGC CGGGACCGGC
ACCGCCTCCG GCGGGAAACA CCGCGGCGTG GCCCCGGGAG CGAGCATCTA CTTCCAGGCC
CTTCTAAACC CGGCCGGCGA ACTCGAACCG CCCGCCGACC TGGTGTCGCT CTTCCGCCCG
GCCTACGAGG CCGGCGCCCG CGTGCACGTG AACGGCTGGG GCGGCCGGAC CAACGCCTAT
CGGAGTGTCA GCGCCCAGGT GGACCGCTTC GTGCACTACT ACCGCGACTT TTTACCCGTG
TTCGGCGCCG GGAACGCCGG CCCGCATCAT GGCACCCTCA CCCCGGAAGC AAACAGCAAG
AACGCCCTGG TGGTCGGGGC GTCTCAGAAC CCCCGCCCGG CCTACGGCCC GGACAGCCTG
GCCGCCGATA AAGCGGCCGC CTTCTCCAGC CGCGGCCCGG CGGCCGACGG GCGCATTAAG
CCGGACCTCC TCGCGCCCGG CACCGCCGTC ATCTCGGCCC GCTCGGCGCT CGTGGCCGAC
AACTACCCGG CCCACCCGGC CTACCAGCGG ATGGAGGGGA CCAGCATGGC CGCGGCCGCG
GCCGGCGGGT CCGCCGTCCT GCTCCGCGAG TACTTCAGGG TCGAGGAACG CCTGGCCCGC
CCCTCGGCGG CCCTCCTGCG CGCCGCCCTG GTGAACGGCG CCCGACCCGT AAAAGGGGCG
GAGCCAAGGC AGACCTTCGG CATCCTGGAC CTCGGCGCCA CCGTCCTCGC CCTGCGCGAG
AAAACCTTCC ACCACATCGA CGCCCACAAC GGCCTGGCGG AGGGCGAGGC CGTCTCCCGC
ACCTTCGCGG TCGAACACCC CGACGCGCCC TTTTCGGCCA CCCTGGCCTG GACCGACCCG
CCCGCCGCCC CGGGGGCGGC CCGCACCCTG GTGAACAACC TGGACCTGAC GGTCACCTCG
CCGGACGGCA CGGTTTTCCA CGGCAACGAC TTCGCGGGCA TCGGCCGGTC CGACGACGTG
AACAACATCG AGCGGGTGGT CATCGCGCGG CCGCAGCCCG GGACCTACAC CGTGACCGTC
CGGGCGGCGC GCGTCGCCGA AAACGCTGCC TGGAGCCGCG GGACGGCGGC GCCCGCCCAG
GACTTCGCCC TGGTGTTCGG CTGCCTTCCG GTGCGGGAGA CGGCCCTTGG CGCGAACGGA
AACGCGCTGG AGACCGCCGG CGGCGGCCGG GTCGAACTCC CGCGCGCCGG GGCGAAAAAC
CTGGTGAACG GGGTGCGCGC CGGCGGCACC GCAAAGGACA TTCTGCCCGG CGCCGACCTC
TATCTGTTCG GACCTTCCGC TGAGGCGCCC CGGGCTGCGT ACGCCGTGTC CGCAACCTGG
CGCGCCGGGG CGGTGAAAAC CCTGGACTTC GAGGGGGAGA CCGTGTTCGC GGCCATCAAT
CCGCTGGAGC GGGAGGGCGG CTACTTCCTG GCCCCGCAGG GCCGGAACGC CGTCTGGATC
AACGGCGCCC CGGGGACCCC GGAAGCGCTG CCTCCGGGGG TGGAAATCAC GGGTGCCGTC
AACCCGTCCA CCCAGACCCT GTGGCGGGTG GAGGCCTTCT ACCGGGAGCG GGACGGACTC
CTGGCCGCGA TTGACGCCGC CGCCGGGAAG ATCCGGCTGG TCGGGGACGA GGAGCCCCTG
CGGATTTCCC CCGCGGCCGC CGTTTCCATC GACGACGTCG TGGTGGACGG CTGTTGGATC
GACCGGCCCT TCGGCGCGGC TGGCGCGGCT GTGGTGGGAG AACTGCGGGC CGGCATGGCG
GTCCGCCTGG TCCTGTCGCC AACCACCGGG GAAGTGCAGT ATATCAGCGC CCGCCGGCCG
ATCGCCTTTG GCGGGCTGCA CGCGGTCGAC CCCGAAAGCC GGCGCCTGAC TCTGGAAACC
GGCACCGAGT TCAAAGTCTT TCCCGGCGCC GCCATCCGCC GGGACCGGGA GACCGTGCCT
CTTGAAGCCT TGCGGCCGGG CGACCGCCTC CTGGCGGTGC TCCTGCCGGG TTCGCGGGAA
GTGCTGGGGG TGGAGGCGTT CTCGCGGGTG CTGTACGGCC AGGTGCTGTA CACCGGCGAA
ACCGTGGCTT ACCTGATGGA CGAGTACGAC GTGTTTCGAA GTATCACCTT TACGCCCGGC
ACCCAGTTCT TCCGCTGGGG CCTGCGGGTG GACGCCGCCG CGCTGTCCCC CGGTCTCTGG
GTGCGGGTGC TCCTGGACCC GGCGGGGCAC CCGCACCAGC CGGGGCGGGT CGGCCGGGCG
CTGCGCTTCG ACGTTGCCGA ACGGGCGGTC CGAGGGGCGG GCACCCTGGA AATGTATGAC
CCCGGCCGCC GGCTGGTCCG CATCGACGGA CAGGAGTACC GGCTGGACCC GCGCACCGCG
GTGCTCAAAA ACGGCTACCC GGTCACCGCC GAGAGCCTGC GCCCCGGCGA ACGGGTGGAG
TTCACCGCCC TGCCGGCCGG GGCGGAGCAG GTGCTGATCG AGGTGGCGGC GCGGTCGGTT
CCCGGCGTAC CCGCTCCGGA GCTGAGCGCT TCCGGACTGC CGTTTAACGG CTACCTGCTG
GTGAGCGGGC GCACCAGCGC CGACCGGGTG CATTTCGTGC ACGCCGACGG CAGCCGCTTG
GAAGTGCCCC TGCGGGAGAG GAGCTTCGCC TACCCGGTCC AGAGGCAGCC CGGTGAAACC
AGCCTGCGGG TGGTGGCGGT GGACAGCCAG AGCGGCGCCG TCACCGGGCA GACGGTGTCC
TTCCCGCCGC TCCGGGAAGC GCGCGTCCTG ACGGACATCC GGGGCTCCTG GGCCGAGCGG
GACATCCAGG CCCTGAGCGC CCGGAACCTG ATGGTCGGCT ATCCGGACGG CACCTTCCGG
CCGGACCGCC CCGTGAACCG CGCCGAGTTC AGCGCCGTGC TGGTGCGCCT CCTGGGCTGG
CCCACCAGAC CGGGCGCCGC CCCCGGCTTT GCCGACGATG CCGCCGTCCC GGACTGGGCC
CGGCCCTCGG TCGCCGCCGC CCGCGACCGC GGTCTGGTCA GCGGCTACCC GGACGGCACC
TTCCGCCCTG CGGCTCCCGT CACCCGGGCC GAGGCCGCCG CCGTCCTCGT GCGCGCGCTT
GAGCAGTTCC GGGACCCGCC GCCGGATTCC CCGCCGCCCT ACGCCGACTG GGCCCTGGTG
CCCGACTGGG CGCAAGCCCC CGTGTCGCGC GCCTACGAGG CCGGGATCTT CCGCGGCCGC
CCGGACGGGC GCTTCGCCCC CGCCGCCCCC GTTACCCGCG CCGAGCTGGC CGCGGCCCTA
AACCGCTTCC TCGCCGCCGG CCGGTAA
 
Protein sequence
MQKQRQLFVL GALVVLSALL ITVFLLAPGG GGLFGPAAGP ETRPGKTGRT GPLTVLETVP 
PPASAAAAAD AGRPADGSGG DPLVLNVTLF RADAKDRVAA LVHAHGGTVL RGLDEEDGRV
LRVSLSTPLP EALAGSPDVF SLEPYEAPVL LNDRVRAVIG ADFLTVPGFA TPSGLTGAGQ
IVAVADSGLD RGRTDEIHPD LASVPGRMPK VVLLRSWSGG GTADPVGHGT HVAATVAGTG
TASGGKHRGV APGASIYFQA LLNPAGELEP PADLVSLFRP AYEAGARVHV NGWGGRTNAY
RSVSAQVDRF VHYYRDFLPV FGAGNAGPHH GTLTPEANSK NALVVGASQN PRPAYGPDSL
AADKAAAFSS RGPAADGRIK PDLLAPGTAV ISARSALVAD NYPAHPAYQR MEGTSMAAAA
AGGSAVLLRE YFRVEERLAR PSAALLRAAL VNGARPVKGA EPRQTFGILD LGATVLALRE
KTFHHIDAHN GLAEGEAVSR TFAVEHPDAP FSATLAWTDP PAAPGAARTL VNNLDLTVTS
PDGTVFHGND FAGIGRSDDV NNIERVVIAR PQPGTYTVTV RAARVAENAA WSRGTAAPAQ
DFALVFGCLP VRETALGANG NALETAGGGR VELPRAGAKN LVNGVRAGGT AKDILPGADL
YLFGPSAEAP RAAYAVSATW RAGAVKTLDF EGETVFAAIN PLEREGGYFL APQGRNAVWI
NGAPGTPEAL PPGVEITGAV NPSTQTLWRV EAFYRERDGL LAAIDAAAGK IRLVGDEEPL
RISPAAAVSI DDVVVDGCWI DRPFGAAGAA VVGELRAGMA VRLVLSPTTG EVQYISARRP
IAFGGLHAVD PESRRLTLET GTEFKVFPGA AIRRDRETVP LEALRPGDRL LAVLLPGSRE
VLGVEAFSRV LYGQVLYTGE TVAYLMDEYD VFRSITFTPG TQFFRWGLRV DAAALSPGLW
VRVLLDPAGH PHQPGRVGRA LRFDVAERAV RGAGTLEMYD PGRRLVRIDG QEYRLDPRTA
VLKNGYPVTA ESLRPGERVE FTALPAGAEQ VLIEVAARSV PGVPAPELSA SGLPFNGYLL
VSGRTSADRV HFVHADGSRL EVPLRERSFA YPVQRQPGET SLRVVAVDSQ SGAVTGQTVS
FPPLREARVL TDIRGSWAER DIQALSARNL MVGYPDGTFR PDRPVNRAEF SAVLVRLLGW
PTRPGAAPGF ADDAAVPDWA RPSVAAARDR GLVSGYPDGT FRPAAPVTRA EAAAVLVRAL
EQFRDPPPDS PPPYADWALV PDWAQAPVSR AYEAGIFRGR PDGRFAPAAP VTRAELAAAL
NRFLAAGR