Gene Daud_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_2060 
Symbol 
ID6026807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2171581 
End bp2172615 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content61% 
IMG OID641594881 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_001718182 
Protein GI169832200 
COG category[K] Transcription 
COG ID[COG1420] Transcriptional regulator of heat shock gene 
TIGRFAM ID[TIGR00331] heat shock gene repressor HrcA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCATCG ACGAACGGAA AAAACAGATC CTCCGGGCCA TAGTCCTCGA TTACATCGCC 
ACCGCGGAGC CGGTCGGTTC CCGGACCATC GCCCGCAAGT ACGGGCTGGG AATCAGCCCG
GCCACCATCC GCAACGAAAT GGCCGACCTG GAGGAGATGG GCTATCTCGA ACAGCCGCAC
ACCTCCGCCG GCCGCATTCC CTCACAGCGG GGCTACCGGT ACTACGTCGA CGAACTCATG
GAACCCGAGA CGCCGGCCGA AGAAGAAAAG CTGATCATCA AAACCAACTA CCAGGCCAAA
GTGAAGAGTA TCTCCGAAGT CATTGAACGG ACCGGACAAC TGATGAGCCA GCTGACCAGC
TACGCCGCCC TGGTGTCGAC GCCCCGGGTG ACCGGGAGTA CCGTCCAGCA CGTGCAGTTG
ATCGCCATGG GTGGGGGCAA GGCCATGGTG CTGGTGGTCA CCGAACCCGA GAAAGTGCAC
ACCCGAGTCA TCGACTTGCC GGAAAACATC ACGGCGGAGG ACCTGGAGAC CGTTTCCCGG
GTCATGAACG CGAAGATCAG GGGCCACAGC TTGAACGACA TCAGGATCAC CATCCTCCGC
GAGATATACC TTGAGTTGTT GCGCCACAAG GCCGTGGTCG AATACATCAT GGACCTCATT
GAGGACAGCG GCGAGAGCAC GGAAGACCGG GTTTACCTGG GCGGGATCCT GAACATCCTG
AACCAGCCCG AGTTCCGGAA CGTGGAGAAA ATGAAGACGC TGTTGAGCCT TCTTGACCAG
GAGGCGCTGC TGTCGTCCCT GCTGGCCGAG CAGGCCGGAC AAGAGGAGGG GATCACCGTC
CTCATCGGCG ATGAGTTCAA GTGCGACCTT ATCCAGGGCT GCAGCCTGGT GAGCGCGCGC
TACGGGGTGG AGGGGCGCGC CGTGGGCGCC TTGGCGGTGC TCGGTCCAAG CCGCATGGAC
TACGCCCGGG TGACCGGGCT GGTGGAATAC CTGACTCGAA ACCTTTCCCG GGTTTTGGAG
AAACTGTATA GGTAG
 
Protein sequence
MGIDERKKQI LRAIVLDYIA TAEPVGSRTI ARKYGLGISP ATIRNEMADL EEMGYLEQPH 
TSAGRIPSQR GYRYYVDELM EPETPAEEEK LIIKTNYQAK VKSISEVIER TGQLMSQLTS
YAALVSTPRV TGSTVQHVQL IAMGGGKAMV LVVTEPEKVH TRVIDLPENI TAEDLETVSR
VMNAKIRGHS LNDIRITILR EIYLELLRHK AVVEYIMDLI EDSGESTEDR VYLGGILNIL
NQPEFRNVEK MKTLLSLLDQ EALLSSLLAE QAGQEEGITV LIGDEFKCDL IQGCSLVSAR
YGVEGRAVGA LAVLGPSRMD YARVTGLVEY LTRNLSRVLE KLYR