| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_2048 |
|---|
| Symbol | |
|---|
| ID | 6025460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 2159637 |
|---|
| End bp | 2160608 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641594869 |
|---|
| Product | PhoH family protein |
|---|
| Protein accession | YP_001718170 |
|---|
| Protein GI | 169832188 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCGGAAC AGGTTGAAAA GAGAATTGCG GTTCCGGATC CCCGGGTGGC GGCCGCCATT
ATCGGGAACT ACGATGAACA CCTGGCGATT CTGGAGGACG ATCTGGGGGT GCGCGTAGTC
CTGCGCAACG GGGAAATGAT TCTTTTCGGC ACCCCGGAGC AGGTGGCTGA AGGACAGGAG
GTCATCCGCC AATTGGAGGC CTTCTTCCTG GAGCGCCGCG ACTTGACGCC TTCCGACGTC
AAGTATATCA TCAATAGCGT ACGTGTCGGG GAGCAGGCCG GCCTGGCGGG CCTGGCGCGC
GACGTGATCC TGACCACTCC CCGGGGCAAG CCGGTGCGAC CCAAGACGCT GGGACAGCAG
AGATACGTCC GGGCCATGTC CGAAAAGGAC GTGGTTTTTT CCATCGGCCC GGCCGGGACC
GGGAAGACCT ACCTGGCCGT GGTGATGGCG GTGCGGGCGC TGCGCAACAA GGAAGTGGGC
CGTCTGATCC TGACCCGGCC GGCCGTGGAG GCCGGCGAGA AACTGGGGTT CTTGCCCGGA
GACCTTCAGG AGAAGGTCGA CCCGTATCTG CGTCCCCTGT ACGACAGCCT GTTTGATGTG
CTGGGTGTGG AAAACACCCG GCGTTACCTG GACCGGCACA TTATCGAAAT CGCCCCCCTG
GCCTACATGC GGGGACGGAC GCTCGAGGAC GCCTTCATTA TCCTGGATGA GGCGCAAAAC
ACCACCCCGG AGCAGATGAA GATGTTCCTG ACCCGGATGG GTTTCGGGTC CCGGGCGGTG
ATCACCGGTG ACATCACCCA GATCGATTTG CCCAGGGGAC AAGCCTCCGG GCTGATCGAG
GCCGAAGAGG TGCTCTCGGG GACCGCCGGG ATCGAGTTTG TATACCTGAC CGGGGCCGAC
ACAGTCCGTC ACGCGCTGGT GATCAAGATC GTGGAAGCCT ATGAGCGGGC CGGGAGGCTG
AAAGAGGAGT GA
|
|---|
| Protein sequence | MAEQVEKRIA VPDPRVAAAI IGNYDEHLAI LEDDLGVRVV LRNGEMILFG TPEQVAEGQE
VIRQLEAFFL ERRDLTPSDV KYIINSVRVG EQAGLAGLAR DVILTTPRGK PVRPKTLGQQ
RYVRAMSEKD VVFSIGPAGT GKTYLAVVMA VRALRNKEVG RLILTRPAVE AGEKLGFLPG
DLQEKVDPYL RPLYDSLFDV LGVENTRRYL DRHIIEIAPL AYMRGRTLED AFIILDEAQN
TTPEQMKMFL TRMGFGSRAV ITGDITQIDL PRGQASGLIE AEEVLSGTAG IEFVYLTGAD
TVRHALVIKI VEAYERAGRL KEE
|
|---|
| |