Gene Daud_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1980 
Symbol 
ID6026507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp2083691 
End bp2084149 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content64% 
IMG OID641594801 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_001718103 
Protein GI169832121 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000794867 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCGA CACCCACCAG GTACTCTGTT ACCGCGGCCT GTGCCGAAGG ATCCACAGCA 
CTGAACGCTT TCGACAACGC GCTTCTGGCG GCCCGTATCG GCAATGTCAA TCTGGTGCGC 
TTATCCAGCA TTCTGCCGCC GAACGCCGTT TACGACCCCG ACCTGCAGCT GCCCCCGGGC 
GCGCTGGTAC CTACCGCTTA CGGTTCCATC GTGTGCGACG CCGAGGGGGA GCTGATCGCC 
GCCGCCGTCG GGGTGATCAT CTCCCCGGAC GGCATCGGCG TGATCATGGA ATACGGTGGA 
AAGTGCAGTC GCCAGGAGGC TCACGACACC GTAAGCAAGA TGCTGGACGA GGCTTTCGCC 
CGGCGCGGGC TGACCGCGCA GGAAAAGAGA ATTGCCGCCG TGGAGCACCG GGTGGAACGG 
GTGGGATGTT GCCTGGCGGC CGTGCCGCTG TGGTATTGA
 
Protein sequence
MLPTPTRYSV TAACAEGSTA LNAFDNALLA ARIGNVNLVR LSSILPPNAV YDPDLQLPPG 
ALVPTAYGSI VCDAEGELIA AAVGVIISPD GIGVIMEYGG KCSRQEAHDT VSKMLDEAFA 
RRGLTAQEKR IAAVEHRVER VGCCLAAVPL WY