Gene Daud_1928 details

Gene Information

• Locus tag: Daud_1928
• ID: 6027033
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Desulforudis audaxviator MP104C
• Kingdom: Bacteria
• Replicon accession: NC_010424
• Strand: +
• Start bp: 2031620
• End bp: 2032183
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641594746
• Product: tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit
• Protein accession: YP_001718052
• Protein GI: 169832070
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
• TIGRFAM ID: [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTACAAGA AACAGATCAA CACGCCTTTG ACCGATGAGG TGATCGCCGA CCTGCACGTC 
GGCGACCACG TGTCCCTGAA CGGAAAACTG TACACGGTGG GAGACGCGGC CCACAAGAGT 
CTCGTCCAAT ACATCGGCCA AGGAAAGCAG CTGCCTTTTA GCCTGGCGAA CCAGGTCATC 
TACTACGCCG TGGCCACGCC CCCGCCCCCG GGACGCATTG TGGGTTCGGT CGGCCCCACG 
ACGGCGACAC GCATGGATTG CTACACCCCG ACCCTGCTCG CCCAGGGTTT AAAGGGCGTT 
GTCGCCAAGG GCTACCGTTC CGCCGAGGTA ACCCAGGCCA TGCGGGAACA CCGGGCCGTC 
TATTTCGGCG CCGTCTGCGG CGTGGCCGCC CTCCTCAGCC GGTACATAAA GAGTGTGCGC 
CTGGCGGCCT TCCCTGGGTT GGGCGCGGAG GCCGTCTACG AGTACACCGT GGCCGATTTT 
CCGGTAGTGG TCATCAACGA TATCCACGGC GGGGATCTCC ACCTGGAGGG CCGTAGAGTC 
TACGCGCTCA ACCAGGCTAC TTGA 

 

Protein sequence

MYKKQINTPL TDEVIADLHV GDHVSLNGKL YTVGDAAHKS LVQYIGQGKQ LPFSLANQVI 
YYAVATPPPP GRIVGSVGPT TATRMDCYTP TLLAQGLKGV VAKGYRSAEV TQAMREHRAV 
YFGAVCGVAA LLSRYIKSVR LAAFPGLGAE AVYEYTVADF PVVVINDIHG GDLHLEGRRV 
YALNQAT