| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1867 |
|---|
| Symbol | |
|---|
| ID | 6026203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1967875 |
|---|
| End bp | 1968144 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641594685 |
|---|
| Product | RNP1-like RNA-binding protein |
|---|
| Protein accession | YP_001717992 |
|---|
| Protein GI | 169832010 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000148151 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTGCGAA CCCTGTACGT AGGTAATCTG CCCTGGGGCA CGAAGGCCGA AGATTTGGAT
GAGGCTTTCG GAGCTTACGG CGAAGTGGTT TCCAGTCGCA TCATCACCGA CCGGCAGACG
GGCCGCTCCC GTGGCTTCGG CTTTGTGGAG GTTAAGGACG AAGATGCCGA GACGATGATC
AACGCCCTGA ACGGAACCGA GTTCGGCGGT CGAATCATCA CGGTGAACGA AGCCCGTGCC
AGAGACGACA ATAATGAAAG ACGCTTCTAG
|
|---|
| Protein sequence | MVRTLYVGNL PWGTKAEDLD EAFGAYGEVV SSRIITDRQT GRSRGFGFVE VKDEDAETMI
NALNGTEFGG RIITVNEARA RDDNNERRF
|
|---|
| |