| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1748 |
|---|
| Symbol | flhA |
|---|
| ID | 6027332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1841813 |
|---|
| End bp | 1843891 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641594565 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_001717876 |
|---|
| Protein GI | 169831894 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTGG CGGTGGTGGA ACGGCAGTCC TGGATCAAGC GGTACGCAGA CATGGTCATC
GCGGGCCTGA TCATCGGGAT CGTGCTCCTG ATCATCATCC CCCTGCCGCC GGCCGCCCTG
GACTTCTTCC TGGTCATCAG CCTGGGGCTC GGGATGATCA TCCTCCTGAT CACCCTTTTT
GTGACCGACG CGCTGGAGTT TTCGGTGTTT CCCACGCTGC TCCTGGTGGT CACCCTGTAC
CGTTTGGCGT TGAACATCTC CTCCACCCGG CTCATCCTAG GCGAGGCGGA GGCCGGCAAG
GTGATCGCCG CTTTCGGCGA GTTCGTGGTC GGCGGGAGCT ATATCGTTGG GTTCATTGTA
TTCCTGATCA TCACCCTGGT TCAGTTCGTG GTCATCACGA ACGGCTCCAG CCGGGTGGCT
GAGGTGGCCG CCCGGTTCAC CCTGGACGCC ATGCCCGGGA AGCAGATGGC GATCGACTCC
GATTTCAACG CCGGGCTGAT CACCGAGCAG GAGGCCCGGG AGCGGCGCCG GCGGCTGCAG
CGGGAATCGG ACTTCTATGG GGCGATGGAT GGCGCCACCA AGTTCGTGCG CGGGGACGCC
ATCGCCGGGC TGGTGATTGT GTTCATCAAC ATCATCGGGG GGCTGGTGAT TGGCATCGCG
GTAATGCAGA TGGACGCCCA GCAGGCGCTG ACCACTTTCA CCATCTTGAC CATCGGCGAC
GGCCTGGTCA CCCAGATTCC GGCCGTGCTG GTATCCACCG CCACCGGCAT CCTGGTGACC
AGGGCCGCTT CGGACACGAG CTTCGGGGGC GACGTTTCCC GGCAGTTCTT GAGTTTCCCC
CGGGTGTTGG TGGTGGCCGC GGGAGTGCTG GTGGTGATGG GCCTGATCCC GGCCATGCCG
AACCTCTTGT TTCTGGGGAT GGGCGCGGCC CTGGGCCTCC TGGCATACAA CCTGAACCGG
GAGGAGCGCC GGCGGGAGGT GGCGGCGGCG GAGCAGGCGG CCGCCCGGGA GGTGCGCGAG
CAAAAACGCG AGCCGGAAAA CGTGCTTACC TACTTCCAGG TCGACCCGCT GGAGGTGGAG
ATCGGATACA ACTTGATCCC CCTGGCAAGC GAGGAACAGG GCGGAGACCT CTTGCACCGG
GTGGCGGGTG TGCGACGCCA GTGTGCCCAG GAGTTGGGCA TTTACGTCCG CCCGATCCGG
ATCCGGGACA ACCTGCAACT TAAGCCGAAC ACCTACGTTT TTAAGATGCG CGGGGTGGAA
GCGGCGGAGG GCGAACTGGA GCCCGGGCGG TATCTGGCGA TGGACCCGAC GGGGGACCGG
ACTCTACAGG GCATTCCCAC CCGGGAACCG ACCTTCGGGC TGCCGGCCTG GTGGATCGCG
CCCGAGAACC GCGAAGCGGC CGAGATCGAC GGGTTTACCG TGGTCGATCC GGCGACCGTC
CTGGCCACGC ACCTTTCGGA GTTCATCAAG CGGCACGGGC ATGAATTGCT GGGACGGCAG
GAGGTGCAGG AACTGCTGAA CGTGGTCAAG GAGAAGAACC CGGCGGTGGT CGAGGAATTG
GTTCCCGGGC TGTTGTCACT GGGTGAGGTG CAGAAGGTGC TGCAGAATCT GCTTAAAGAA
CGTGTTCCGA TCCGCGATAT GGTGTCCATC CTCGAGGCGC TGGCCGACTG CGCCCGGCAG
GACCGGAACG AGGACGCCCT GACCGAAGCG GCCCGTAAGG CCCTGTCCCG GACCATCTCC
CGCCTGCACG CCCGGGAGGG CGGGAAGATC CGGGTGATCA CCCTGCACCC GCGGCTGGAA
CAGCGACTCA TCGACGCCGT GCAGCCGACG GCGCTGGGCG CTTTCCCGGT TCTGGAGCCC
GGCACGGCCC AGAGAGTCAT TCAAAGCCTG GGGGCCGCGG TGGAAAAGGC GCAGAGTAAG
GGTCACCTCC CGGCGGTGCT CTGCTCGAGC CGGGTACGGC TGCCGTTCCG GCGCCTGACC
GAGAGGCATT TCCCGCACCT GTCCATCCTG GCGCTGCAGG AGATTGCGCC GCAGATTGAT
GTGGAGGCGG TAGGGACGGT GACCCTGGAT GAGGATTAA
|
|---|
| Protein sequence | MEVAVVERQS WIKRYADMVI AGLIIGIVLL IIIPLPPAAL DFFLVISLGL GMIILLITLF
VTDALEFSVF PTLLLVVTLY RLALNISSTR LILGEAEAGK VIAAFGEFVV GGSYIVGFIV
FLIITLVQFV VITNGSSRVA EVAARFTLDA MPGKQMAIDS DFNAGLITEQ EARERRRRLQ
RESDFYGAMD GATKFVRGDA IAGLVIVFIN IIGGLVIGIA VMQMDAQQAL TTFTILTIGD
GLVTQIPAVL VSTATGILVT RAASDTSFGG DVSRQFLSFP RVLVVAAGVL VVMGLIPAMP
NLLFLGMGAA LGLLAYNLNR EERRREVAAA EQAAAREVRE QKREPENVLT YFQVDPLEVE
IGYNLIPLAS EEQGGDLLHR VAGVRRQCAQ ELGIYVRPIR IRDNLQLKPN TYVFKMRGVE
AAEGELEPGR YLAMDPTGDR TLQGIPTREP TFGLPAWWIA PENREAAEID GFTVVDPATV
LATHLSEFIK RHGHELLGRQ EVQELLNVVK EKNPAVVEEL VPGLLSLGEV QKVLQNLLKE
RVPIRDMVSI LEALADCARQ DRNEDALTEA ARKALSRTIS RLHAREGGKI RVITLHPRLE
QRLIDAVQPT ALGAFPVLEP GTAQRVIQSL GAAVEKAQSK GHLPAVLCSS RVRLPFRRLT
ERHFPHLSIL ALQEIAPQID VEAVGTVTLD ED
|
|---|
| |