| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1604 |
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| Symbol | |
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| ID | 6025767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1692481 |
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| End bp | 1693317 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641594427 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001717738 |
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| Protein GI | 169831756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.728905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATTTA CGAAAATGCA CGGTCTGGGC AATGACTTCG TGATTGTGAA CGGGTTCGGC
CAGTCCCTTC CGGATGACCC GGGGGCTCTG GCCCGGCGGG TTTGCGACCG GCGGCTCGGG
GTGGGCGCGG ACGGGCTGGT GCTGCTTCTG CCCTCGGCGG CGGCGGACCT GCGGATGCGG
GTCTTCAACC CGGACGGCAG TGAGCCCGAG ATGTGCGGCA ACGCCATCCG GTGCGTGGCC
CTTTACGCCC GCCGGCGCGG TCTAGTTGCC AAAACGCAGC TCGAGGTGGA GACCCTGGCC
GGGCTGATCC GGCCGGAAAT CCTGCTCGAC GGCGACCGGG AAACGGTGCG GGTGGACATG
GGCCGGCCGC GGCTGGAGCG GGCCGAGATT CCCATGCGGG GCCCCGCGGG GCCGGTGGTC
GGTGAGGTGC TGGACGCCGG GGAGCGGTCG TTTATGGTGA CGGCCGTTTC CATGGGCAAC
CCGCACTGCG TGGTGTTCGG TGCGGACCTG GACGACGCCG GGTTTCGAAA ATACGGTCCG
CTTTTGGAGG TCCACCCGGC ATTTCCGGCC CGGACCAACG TAGAGTTTGT AGAGGTCTTG
AGTCCCGGGG AAGTGGCGGT ACGGGTCTGG GAGCGGGGGG TCGGGCCGAC GCCGGCCTGC
GGCACCGGAG CCTGTGCGGT GGCCGTGGCT GGGGTATTGA CCGGCCGGAC CGCCCGGAGG
GTGCACGTGC GGCTGCCCGG GGGCGTACTG CTGATTGAAT GGCCGGACGA CGCGGGGCCG
GTGTACATGT CCGGTCCGGC CGAGGAAGTG TTCGACGGAA AGTGGGTCAG AGCTTAG
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| Protein sequence | MEFTKMHGLG NDFVIVNGFG QSLPDDPGAL ARRVCDRRLG VGADGLVLLL PSAAADLRMR
VFNPDGSEPE MCGNAIRCVA LYARRRGLVA KTQLEVETLA GLIRPEILLD GDRETVRVDM
GRPRLERAEI PMRGPAGPVV GEVLDAGERS FMVTAVSMGN PHCVVFGADL DDAGFRKYGP
LLEVHPAFPA RTNVEFVEVL SPGEVAVRVW ERGVGPTPAC GTGACAVAVA GVLTGRTARR
VHVRLPGGVL LIEWPDDAGP VYMSGPAEEV FDGKWVRA
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