| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1557 |
|---|
| Symbol | |
|---|
| ID | 6025704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1642613 |
|---|
| End bp | 1643068 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641594380 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001717691 |
|---|
| Protein GI | 169831709 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0237413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTGT CGACGCGCGT GCGTTACGGC ACCCGGGCAC TGGTGGACAT TGCGGAGCAT
CACGGCAACG GTCCGGTATG CTTGAGGGAC ATCGCCCGCA GGCAGAAGGT ATCCCAACCC
TATCTTGAAC AGTTGATCCT GCTCTTGAAG GCGGCTGGTC TGGTACGCAG CATCCGGGGT
GCGCGTGGGG GTTTTGTCCT GGCCCGCGAC CCGGCGGAAA TCAGTATGAT CGAGGTTATG
ACCACTCTGG GTTGGGAAAG CGAAGTGGTG GACTGTGTTG GTGATCCGGG GTCCTGTTCC
CGGGCGGGCG CGTGTGGCAT GCGCGACTTC TGGTGCCGGC TTTCTGATGC CGTCTCGAAA
GTGGTTGGTT CCACAACTCT GGCCGATTTG ATGCAAGAGC AGGCGGAAAC GTCAAACAGC
CATTGCCGAC CGGGATACCG GCGGGTGGGT TGCTAG
|
|---|
| Protein sequence | MRVSTRVRYG TRALVDIAEH HGNGPVCLRD IARRQKVSQP YLEQLILLLK AAGLVRSIRG
ARGGFVLARD PAEISMIEVM TTLGWESEVV DCVGDPGSCS RAGACGMRDF WCRLSDAVSK
VVGSTTLADL MQEQAETSNS HCRPGYRRVG C
|
|---|
| |