Gene Daud_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1552 
Symbol 
ID6026033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1638559 
End bp1639737 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content60% 
IMG OID641594375 
ProductYibE/F family protein 
Protein accessionYP_001717686 
Protein GI169831704 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.66872e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTTACA GAACGGCACT GATGACGGCG GTCTTGGGCG CAACACTTAT CCTCATTGCA 
ATGGGTTTTT GGGTCACCAA CGGGGAAGCA AGCGTTGGAG AACGCGCGAG GGAGGAGTTT
TTCCGGGCCC GGGTGTTGAC CGTGGAGAAA GTCGAAACCG AGAATGCATT GGCGCCCGGT
TTTGTGCTGG AGCAGCAGTT GCTCACTGTC GAAGTCACCG CCGGACCATA TAAAGGCCGG
CACGTTACAG TCGTGGACAA TCACACCGGA AACCCTGCCT ACGATCTCCA CGTGCAGCCC
GGGGACAGAG TGCTGGTCTC GGCCGAGGTG GTTAACGGGG AGTTGATCAA CGCCCACCTG
GCCGACTATG CCCGGGATCA GTATCTTGTC TACTTGATCG GCGGCTTTGT CCTGGCCCTG
GTGGTGATCG GCGGCCTAAA GGGCGTGAAG GCGGTCGTCA CCCTGCTGAT CACCGGTCTG
GCTGTCGGTT GGGTTCTGCT GCCGCTGCTG TTGAAGGGCT ATAACCCCAT TGTTTTGGCG
GTGCTGGTTT CAGCGGCGGT GGTGGCCTTG ACGTTCGCCC TGGTCGGGGG TCTCGGTGTT
AAGACGCTAG CCGCGACTAT CGGCACGACC GGCGGGGTGA TGGTGGCCGG GATGATGGCC
TTTCTGGTCG GTTCGGCGGC GCAGTTGAGC GGATTTGCCA GCGACGAGGC CATAGCGTTG
CTGTATGTCC CACAGGAAAT CCAGTTCGAT TTCCGGGGCA TACTATTTGC CGGGATCATC
ATCGGGGCCA TGGGGGCGGT AATGGACGTG GGGATGTCTG TGGCCTCCGC GATGGAAGAA
GTCAAGAAGG CCAACCCGGC CATACGGCCG CGAGGCCTGT TTTCCGCCGG CATGAATGTG
GGCCGGGATG TAATGGGGAC CATGGCCAAC ACACTGATTC TCGCGTACAC CGGCGCGGCC
ATCCCGCTGC TCCTGGTGTT TCTCGCCTAC GATACACCGT TCCTGAAGAT TATCAATCTC
GACATGATCG CTACCGAGGT GGTGCGGGCC CTGGCCGGCA GCATCGGGCT GATCTTATGT
GTGCCCCTGA CCGCCGTGGC TGCCGCCCTG TTGATGGGCC GGAAATCCGT AGGTTCCGGC
GTTCCCCATA CTCAAAAGAA TTCGCCGAAA AGTACTTGA
 
Protein sequence
MPYRTALMTA VLGATLILIA MGFWVTNGEA SVGERAREEF FRARVLTVEK VETENALAPG 
FVLEQQLLTV EVTAGPYKGR HVTVVDNHTG NPAYDLHVQP GDRVLVSAEV VNGELINAHL
ADYARDQYLV YLIGGFVLAL VVIGGLKGVK AVVTLLITGL AVGWVLLPLL LKGYNPIVLA
VLVSAAVVAL TFALVGGLGV KTLAATIGTT GGVMVAGMMA FLVGSAAQLS GFASDEAIAL
LYVPQEIQFD FRGILFAGII IGAMGAVMDV GMSVASAMEE VKKANPAIRP RGLFSAGMNV
GRDVMGTMAN TLILAYTGAA IPLLLVFLAY DTPFLKIINL DMIATEVVRA LAGSIGLILC
VPLTAVAAAL LMGRKSVGSG VPHTQKNSPK ST