| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1478 |
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| Symbol | clpX |
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| ID | 6026715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1563033 |
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| End bp | 1564286 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641594296 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001717616 |
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| Protein GI | 169831634 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0037217 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACG AGAAGGGCCA GTTGAAATGT TCGTTTTGCG GTAAGCTGCA GGATCAGGTC
AAGAAGCTGG TGGCTGGTCC CGGGGTATAC ATTTGTGATG AATGCATAGA GCTTTGCAAC
GAGATCATCG AGGAGGAACT CAGCGAGGAT CTGGGGCTGG AGTTGCGGGA TATTCCGAAG
CCGCGGGAAA TCAAGGATTA CCTGGATCAG TACGTGATCG GCCAGGAGTA TGCAAAGAAA
ATCCTCGCCG TGGCCGTTTA CAACCATTAC AAGCGGATAA ACCTCGGCGG CAAGCTTGAG
GACGTGGAGC TGCAAAAGAG CAACATTGTC ATGCTCGGGC CGACCGGTTC CGGGAAGACC
TTGCTGGCGC AGACGCTGGC GCGGTTTCTA AACGTGCCCT TTGCAATCGC CGACGCCACT
TCGCTGACCG AGGCCGGGTA TGTGGGAGAG GATGTGGAGA ACATCCTCCT GAAGCTCATC
CAGGCCGCCG ATTACGACGT GGAGAAGGCG GAGAAGGGCA TTGTGTACAT CGACGAGGTC
GACAAGATCG CGCGTAAGTC GGAAAACCCT TCCATCACCA GGGACGTTTC CGGCGAGGGC
GTGCAGCAGG CCCTCCTGAA GATTCTGGAG GGTACGGTGG CCAGCGTGCC GCCGCAGGGC
GGCCGCAAGC ACCCGCACCA GGAGTTCATC CAGCTGGATA CCACAAACAT TCTGTTCATC
TGCGGCGGGG CCTTTGAGGG GATCGACAAG ATCATCCAGA GCCGGGTGGC TAAGAAGACT
ATGGGGTTCG GGGCCGAACT GACGCTGAAG CGGGACCGCA AGCTGGGTGA CATCCTGCGG
AACATCCTGC CCCAGGATCT CTTGAAGTAC GGCCTGATCC CCGAGTTTGT CGGGCGCCTG
CCGGTCATCG TGACGCTGGA CCCGCTCAAC CAAGAGGACC TGGTCAGGAT CCTGGTTGAG
CCGCGCAACG CCCTGGTGAA GCAGTATGAG AAGCTCTTCG AAATCGACGG GGTCGCCCTG
GAGTTTCAGG AAGAAGCGCT CCAGGCCATC GCTGAGGAGG CTATCCGGCG CAACACCGGC
GCCCGGGGCC TGCGGGCGAT TCTGGAGGAG ATCATGCTGA ACGTCATGTA TGATATTCCG
TCCCGGGGCG ACGTCGCCAA GTGCACCATT TCGAGGGAAA CGGTCGTGAA CCGGGAGAAC
CCGCTGATCA TTACCGTGGA GCGCAGCAAG AAGAAAAAGG AAAGTGCCTT GTAA
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| Protein sequence | MFNEKGQLKC SFCGKLQDQV KKLVAGPGVY ICDECIELCN EIIEEELSED LGLELRDIPK
PREIKDYLDQ YVIGQEYAKK ILAVAVYNHY KRINLGGKLE DVELQKSNIV MLGPTGSGKT
LLAQTLARFL NVPFAIADAT SLTEAGYVGE DVENILLKLI QAADYDVEKA EKGIVYIDEV
DKIARKSENP SITRDVSGEG VQQALLKILE GTVASVPPQG GRKHPHQEFI QLDTTNILFI
CGGAFEGIDK IIQSRVAKKT MGFGAELTLK RDRKLGDILR NILPQDLLKY GLIPEFVGRL
PVIVTLDPLN QEDLVRILVE PRNALVKQYE KLFEIDGVAL EFQEEALQAI AEEAIRRNTG
ARGLRAILEE IMLNVMYDIP SRGDVAKCTI SRETVVNREN PLIITVERSK KKKESAL
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