| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1438 |
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| Symbol | murD |
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| ID | 6026124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1519982 |
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| End bp | 1521331 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641594257 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001717577 |
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| Protein GI | 169831595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGCTGG CAGGAAAGAG CGTTCTGGTG GTCGGCGCGG GGAAAAGCGG CCAAGCGGCG
GCGCGGTTTC TCACGTCGCA GGGCGTGGCG GTAACCCTGA CCGACATCAA AAAGCTGGAG
GACCTCAAAC TGGGTGCTTT AAACGGCGTG ATTCTGAGCC TGGGCTTCTA CCCCCGGGTT
TCTCCCGGGC GCTGGGACCT GATCGTGGTC AGTCCGGGTG TGCCCCTGGA CGTTCCGCCC
GTGGCCGAGG GCCGGCGGCT TGGCATCCCC GTGATCGGGG AACTGGAATT GGCCTGGTGG
TTCACGCGCT CCCCGGTCGT GGCCGTAACG GGCACCAACG GGAAGACCAC CACCACCGCC
TTGCTGGGGG AGTTGTTCCG GCAAGCCGGC CGCCGCACCC TGGTCGCCGG GAACATCGGG
GTGCCCCTGA TTACGGAGGT CGAGAACTAC GGCCCCCAAG ACGTAATCGT GGCCGAGGTG
TCGAGTTTCC AGCTCGAAAC CACCCGCGAT TTCCGTCCCC GGGTGGCGGT CATCCTAAAC
CTAACTTCTG ATCACCTGGA CCGACACGGC ACCATGGAAG CCTACATCGA AGCCAAAGCC
GCCATCTTCG CCAACCAGCA AGCGTCCGAT TGGACCGTAT TAAATTTCGA CGACCCGCGC
ACCAGGGCAC TGGCCTCCCG GACGCGGGCC GAGGTCATAT TCTTCAGCCG CCAGCATAAA
TTAGAGCAAG GTGTGTTTAT CCAGGACGGC CAGATTATGG CACGGGCCGG GGGAAAGGAA
GCGGCCGTCT GCCCGGTCCG GACCCTGTCC ATCCCGGGCG CGCACAACGT CGAGAATGCG
CTCGCGGCAA CGGCGGCTGG CTGGGTGCTG GGTATCGGGC CGTCCGCCCT GGGCCGAGCG
CTGACTTCTT TCCAGGGTGT CCCGCACCGG CTGGAGACGG TCGGCTGGGT CGGTGGGGTG
GAGTACGTCA ACGATTCCAA GGCCACCAAT CCGGACGCGG CCATCCGAGC TCTTGACGCG
TACGCGGGCC CGGTGGTTCT GATCGCCGGC GGGCGCAACA AGGGCAACGA TTTTACCGCC
TTTATGGAGA AAGCCCGGGA AAAGGTGCGG GTTCTGGTCA TTATCGGGGA GTGCGCCGCG
GAGATGGCGG CCGCCGCTGC CCGGGCGGGC CTGGGGGAGG TCCTGCGGGC GAAAGACCTG
CCCGGTGCGG TACAACTGGC GCGGGATGCT GCCCGGCCCG GCGAGGTGGT GCTTTTGTCC
CCGGCGTGCG CCAGTTGGGA TATGTTCCGG AACTACGAGG AGCGAGGCGA CCTCTTTCGC
AGTCTGGTAC GGGAGCTGGC AAATGAATAG
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| Protein sequence | MQLAGKSVLV VGAGKSGQAA ARFLTSQGVA VTLTDIKKLE DLKLGALNGV ILSLGFYPRV
SPGRWDLIVV SPGVPLDVPP VAEGRRLGIP VIGELELAWW FTRSPVVAVT GTNGKTTTTA
LLGELFRQAG RRTLVAGNIG VPLITEVENY GPQDVIVAEV SSFQLETTRD FRPRVAVILN
LTSDHLDRHG TMEAYIEAKA AIFANQQASD WTVLNFDDPR TRALASRTRA EVIFFSRQHK
LEQGVFIQDG QIMARAGGKE AAVCPVRTLS IPGAHNVENA LAATAAGWVL GIGPSALGRA
LTSFQGVPHR LETVGWVGGV EYVNDSKATN PDAAIRALDA YAGPVVLIAG GRNKGNDFTA
FMEKAREKVR VLVIIGECAA EMAAAAARAG LGEVLRAKDL PGAVQLARDA ARPGEVVLLS
PACASWDMFR NYEERGDLFR SLVRELANE
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