| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1426 |
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| Symbol | |
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| ID | 6026494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1508404 |
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| End bp | 1509129 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641594245 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_001717565 |
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| Protein GI | 169831583 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.126635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCGTCAAG CCTGGCAAAT CAGGCTTTAC CTGCGATTAC TGGCGGTCAG GCTCCTGCGG
AGCGTCGGTT ATCATCCCGA GGGTCACTAT GTCGGCAGCA GCGAGACATT GCCGCCACCG
CTCACGGTGG ACGAGGAGAC GGGGTTGATC AGCCGTCTGG AGGCCGGCGA CCACGGGGTG
CGCAGCACCC TGATCGAGCG CAACCTACGC CTGGTGGTGT ATATCGCGCG CAAGTTTGAG
AGCACCGGTG TCGGCATCGA GGATATGGTT TCAATCGGCA CCATCGGCCT GATCAAGGCC
GTAAACACCT TCGACCCCCG GAAACGAATC AAGCTGGCCA CCTATGCTTC ACGCTGCATC
GAAAACGAGA TTCTGATGTA CCTGCGCCGC AACAGCAAGG TCCGCGGGGA AATCTCCTTC
GAGGAACCGC TGAACATAGA CTGGGACGGC AACGAACTCT TGCTTTCGGA CGTGTTGGGC
ACCGACTCCG ACATCATCTA TAAAGACCTG GAGATGGAAG TGGATCACAA GTTACTCCGC
TTGGCTCTCC AGAAGCTGTC CCAGCGTGAA CGCAAGATCA TGGAACTGCG CTTCGGCCTG
AACAACGGTG AAGAAAAGAC GCAGAAAGAA GTGGCCGACC TGCTGGGCAT CTCCCAGTCC
TACATCTCGC GCCTCGAAAA ACGGATCATC AACCGCCTCA AGAAAGAAAT CTACCGCTTC
GGGTAA
|
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| Protein sequence | MRQAWQIRLY LRLLAVRLLR SVGYHPEGHY VGSSETLPPP LTVDEETGLI SRLEAGDHGV
RSTLIERNLR LVVYIARKFE STGVGIEDMV SIGTIGLIKA VNTFDPRKRI KLATYASRCI
ENEILMYLRR NSKVRGEISF EEPLNIDWDG NELLLSDVLG TDSDIIYKDL EMEVDHKLLR
LALQKLSQRE RKIMELRFGL NNGEEKTQKE VADLLGISQS YISRLEKRII NRLKKEIYRF
G
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