| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1393 |
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| Symbol | |
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| ID | 6026201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1475632 |
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| End bp | 1477791 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641594213 |
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| Product | RecD/TraA family helicase |
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| Protein accession | YP_001717534 |
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| Protein GI | 169831552 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGTAA TCCACGGTTA TCTGGAACGA ATTACTTATT ACAACGAAGA AAACCACTTC
ACGGTCGCCC GGCTCCAGGA AACCGGGAAA AGGGAACTGA CCACGATCGT GGGTAACCTG
GCCGGGATCA CCCCCGGGGA GTCTCTGAAA CTGACCGGGA AGTGGGTGCA AGACCCCAGG
TTCGGACCAC AGTTCCGGGT CGAGAGATTC GAGACGGTGG TTCCGGCCAC AGTCAACGGC
ATTCGGAAGT ACCTGGGTTC CGGACTGATC AGGGGCATCG GTCCGGTGAT GGCCAAACGA
ATCGTCAAGG TTTTCGGGTT GCAGACACTG GACGTAATCG ACCGCTCTCC CGGCCGGCTT
ACCGAGGTGG ACGGCATCGG CCCGAAGCGA GTGGAACTCA TCACCAGGGC CTGGGCGGAC
CAGAAGGAAA TCCGGGGAAT CATGATTTTC CTCCAGGACC ACGGGATCAG TGCCGCCTAC
GCCGCCAAAA TATACAGGCA GTACGGGAAC GCGTCGGTCG AGATTGTCAG AACAAATCCC
TACCGCCTTG CCGCCGACGT GCACGGGATC GGCTTTGTCA CCGCCGACCG GATCGCGAGG
CAGGTGGGTA TCGACCCGAA TTCCGTCACG CGGGCCGAGG AGGGAACCCT TTACGTTCTG
AACGAGAGCA CTTCCGAAGG TCACGTCTAC CTCCCCTACG AAACGCTCGT GAGCCGGGCG
GCGGAAATGC TCGAGGTCAG CCGGGATCTC GTGGTCGAGG CCGTGGAGCG GCTGGCTGCG
GACCGGCGCG TAGTGCGGGA AGACGAGGCG GTGTATCTTA CTCCCTTTTA CGTCGCCGAA
ACCAAACTCG CCGAGCGCCT TAACGCCCTC CGGGACGCCG GAGCCGCCGT GCGGCGGGTG
GATACTGCCC AGGTGATACC CTGGGTGGAA AAGAGACTCG GGCTCCGGCT GGCCGAAAAG
CAAGCCGAGG CGGTGTCCCT GGCGGTTTCG AACAAGATCC TGGTGATCAC CGGCGGGCCG
GGTACCGGCA AAACCACCAT CATCAGGGCG ATCATCAGTA TTTTTCAGGC CCTGGGGGCG
CGGGTCCTTC TGGCTGCCCC TACCGGGCGG GCGGCGAAAC GCATGCAGGA GGCCTCAGGG
CACGAGGCCC GGACCATCCA CCGCCTGCTG GAGTTCAGCC CCGGGAAAGG CGGTTTTCAG
CGCAATCAGG ACTTCCCCCT GGACGCCGAC GCCGTCATTG TGGACGAGGC CTCCATGATT
GATACTCTCC TGATGAACAG CTTGGTCAGG GCCGTCCCGC TGTCCGCCGC CCTTATCCTG
GTCGGGGACA CCAACCAACT GCCCCCGGTC GGTCCGGGAA ACGTCTTGCG GGACATCATC
GACTCGGGCC GGTTCGGCGT GGTGACACTG ACCGAGATCT TCCGGCAGTC CCGGGAAAGC
CGGATCGTGG TGAACGCCCA CCGCATAAAC CGGGGCGAGT TCCCCGATTT GAGCCCGCTG
GGCTCCGGCC GGCCGTCTGA CTTCTATTTC ATCCAAGAGG AGGATCCGGA AACGGCGGTC
CAGACCATCC TCAAGCTGTG CAAGGTACGC ATTCCCAGAC GTTTCGGATA CCACCCGATC
CGGGACATCC AGGTACTGAC GCCCATGTAC AGGGGCCTGG TCGGCGCCGC GAACCTGAAC
GCCGAGCTGC AAAACCTGCT GAACCCGGGA AAAGACGGGG TGGTCCGGGG CCACCGGATG
TTTCGGACCG GGGACAAGGT GATGCAGGTG GTGAACAACT ACCAGAAGGA AGTGTTCAAC
GGGGACATCG GCCGGATCAC GGCCGTGCAC TTGGAGCAAC AACAACTGAA GGTGGACTTC
GACGGCCGCG CCGTCAGCTA CGAGTTTTCG GAGCTGGACG AACTGGTCCT GGCCTATGCG
GTGTCCGTGC ACAAGGCCCA GGGGAGTGAA TACCCGGTGG TGATCATGCC GGTGATGACT
CAGCACTACG TTCTCCTGCA GCGGAACCTG GTTTACACCG GGGTGACCCG CGGCCGGAAC
CTGGTGGTGC TGGTCGGCAC CAAAAAGGCA TTGGCCATCG CCATCCGCAA CGACGAGCCG
CGCCGGCGCT ACACCAGGTT GCGGGAGAGG CTTGCATATT ATGACCTGGG TAACGGGTAA
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| Protein sequence | MEVIHGYLER ITYYNEENHF TVARLQETGK RELTTIVGNL AGITPGESLK LTGKWVQDPR
FGPQFRVERF ETVVPATVNG IRKYLGSGLI RGIGPVMAKR IVKVFGLQTL DVIDRSPGRL
TEVDGIGPKR VELITRAWAD QKEIRGIMIF LQDHGISAAY AAKIYRQYGN ASVEIVRTNP
YRLAADVHGI GFVTADRIAR QVGIDPNSVT RAEEGTLYVL NESTSEGHVY LPYETLVSRA
AEMLEVSRDL VVEAVERLAA DRRVVREDEA VYLTPFYVAE TKLAERLNAL RDAGAAVRRV
DTAQVIPWVE KRLGLRLAEK QAEAVSLAVS NKILVITGGP GTGKTTIIRA IISIFQALGA
RVLLAAPTGR AAKRMQEASG HEARTIHRLL EFSPGKGGFQ RNQDFPLDAD AVIVDEASMI
DTLLMNSLVR AVPLSAALIL VGDTNQLPPV GPGNVLRDII DSGRFGVVTL TEIFRQSRES
RIVVNAHRIN RGEFPDLSPL GSGRPSDFYF IQEEDPETAV QTILKLCKVR IPRRFGYHPI
RDIQVLTPMY RGLVGAANLN AELQNLLNPG KDGVVRGHRM FRTGDKVMQV VNNYQKEVFN
GDIGRITAVH LEQQQLKVDF DGRAVSYEFS ELDELVLAYA VSVHKAQGSE YPVVIMPVMT
QHYVLLQRNL VYTGVTRGRN LVVLVGTKKA LAIAIRNDEP RRRYTRLRER LAYYDLGNG
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