Gene Daud_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1383 
Symbol 
ID6026209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1465051 
End bp1465614 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content55% 
IMG OID641594203 
Producttranslation initiation factor IF-3 
Protein accessionYP_001717524 
Protein GI169831542 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000111233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAGCCC GCTCTTTTTT CGGAATTTCA GGAGGTGTAA AGGTTATTTC CAAAGACCAA 
CGCGTGAATC AAGAAATCAG GGCCCGTGAA GTGAGGGTCA TCGATTCTGA CGGGGCCCAG
TTGGGGATTA TGCCCCTGCG AGACGCGCTA CGTCTGGCCG AGGAGAAAGG TTTGGATCTT
GTCGAGGTCG CCTCACAAGC CAGGCCGGTC GTTTGCCGGA TAATGGACTT CGGCAAGTAC
AAGTATGAAC AGAGCAAGCG GGACAAGGAA GCCCGCAAAA AACAGCGGAT TATCACTATC
AAGGAAGTCA AGCTTCGTCC GGGGATCGAG GACCACGACT TCCAAACCAA GGCCAGGAAC
GCGGTCCGGT TCCTGAAAGA TGGGGACAAG GTCAAAGTCA CCCTCGTCTT CCGGGGAAGG
GAGATCGTCC ACCCGCACCT GGGACAGCAG CTCCTGAAGA AGTTGGCCGA ACAAGTTGAG
GAGTTGGCCG TCATTGAGAG GGCTCCGAAG CTTGAAGGTC GTAATATGAT CATGATCTTG
GCCCCGAGGC AGAATCAGCA GTGA
 
Protein sequence
MVARSFFGIS GGVKVISKDQ RVNQEIRARE VRVIDSDGAQ LGIMPLRDAL RLAEEKGLDL 
VEVASQARPV VCRIMDFGKY KYEQSKRDKE ARKKQRIITI KEVKLRPGIE DHDFQTKARN
AVRFLKDGDK VKVTLVFRGR EIVHPHLGQQ LLKKLAEQVE ELAVIERAPK LEGRNMIMIL
APRQNQQ