Gene Daud_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1380 
Symbol 
ID6026198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1463714 
End bp1464361 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID641594200 
ProductTrkA domain-containing protein 
Protein accessionYP_001717521 
Protein GI169831539 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.26197e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT TCGCCGTGAT CGGCCTGGGA CGTTTCGGAT CGAGCGTGGC CACCACGCTG 
GCGAGAATGG GCTACGATGT GCTGGCGGTC GATACGGACG AGCAAAAAGT GGAGCGGATT
GTGGACCGGG TGACGCATGC CGTGCAGGCC GACGCTCTGG ATGATGAGTC CCTGAAGGCC
CTGGGAATGC GCAACTTTGA CGTGGTGATC GTCGCCATCG GGCACGACAT GCAGGCCAGT
ATTCTGACCA CGGTCATGCT CAAAGAGATG GGCGTAAGGA CAGTGGTAGC AAAGGCCAAC
ACCGAGCTTC ACGGACGGGT GCTGGCCCGG GTAGGGGCCG ACAAAGTGGT GTTTCCGGAA
CGGGACATGG GCGTGCGTGT TGCCCGCAGC CTGGTATCCA AAAACCTGCT GGACCATATC
GACCTTTCCC CCGACTTCAG TATTGTCGAG CTGGTGACCC CGAAGGATTT TGTGGGCAAG
AGCCTTCTGG AGGCCGGAGT TAGAGGAAGG TACGGCGTGA ATATCCTGGC GATCCGGCGG
GGGACCGAAG TGCTGATCGC TCCCGGGGCC AAGGAAGTGA TCCGGGAGGG AGACGTGCTG
GTAGCCATCG GGCGGAACGA GCGCCTGGAG AAACTGGGAG GGGACTAG
 
Protein sequence
MKQFAVIGLG RFGSSVATTL ARMGYDVLAV DTDEQKVERI VDRVTHAVQA DALDDESLKA 
LGMRNFDVVI VAIGHDMQAS ILTTVMLKEM GVRTVVAKAN TELHGRVLAR VGADKVVFPE
RDMGVRVARS LVSKNLLDHI DLSPDFSIVE LVTPKDFVGK SLLEAGVRGR YGVNILAIRR
GTEVLIAPGA KEVIREGDVL VAIGRNERLE KLGGD