| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1369 |
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| Symbol | |
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| ID | 6025983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1447540 |
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| End bp | 1449837 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641594189 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001717510 |
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| Protein GI | 169831528 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGCA AGAAACAAAG GGAACGGAGG CTGAACTGGT TTCGCCTTCT TATCGTGCTG
GTGGCCGCGG GAATGCTCCT TGGCGGCTTG GCGGCCTTCG GCCTGGTGGT GGTCAGCCTG
AAGGACCTCC CCACCTGGGA TCCGGCAGCC CTGCAGCCCA ACAACGCCAC CCTGATCTAT
GACGTTCACG GTAACCTGGT GACCGAGATC GGGCTGGAGA ACCGGATTCC GGTGGACATC
GGGGATATCC CGCCCCACGT GAAAAAGGCT TTCCTGGCTG CCGAGGACGT CCGTTTCTAC
CAGCACTACG GGGTGGACCC GCGCGCCATC GCCCGGGCGG TCTGGGCCAA CGTGACCGGC
AGCTTCGGTG AGCAGGGCGG AAGCACCATC ACCCAGCAGT TGGTCAAGAA CTGCTTTTTG
AGCTTTGATA AAACCTTGAA ACGCAAGATC CAGGAAGCCT TTCTGGCCAT CCAGGTTGAA
CGGCATTACG CCAAGGATGA GATTCTCCAG ATGTACCTCA ACTGGGTCTA CTTCGGCGAA
GGGGCTTACG GAATAGAAGC GGCGGCCCGG ACCTACTTCG GTAAGTCGGT GTCCGAACTC
GACTTGTCTG AAGCGGCCAC TCTGGCCGGA CTGCTCAAAG GGCCCTCTAT TTACTCGCCC
TACCGCGACC TGCAGGCGGC CACCAACCGG CGCAATACCA TCCTGGACCT GATGTGGCGT
TACGAGTTTG TCGGCCGGGC GGAAGCCGAG GAGGCCAAAG CCAAGCCGAT TGAACTGGGA
AAGCCGGTAG CGGCCGATAA CCCCGGTCCA AGCTATCCTT ACCCCCACTT CGTGGACCAC
GTCACCGACG TCCTGGTGGA CAAATACGGT GAGGCAAGGG TCTTTAAGGA AGGCCTGCGG
GTTTACACCA CGCTTGATCC GAAAATCCAG CGGGCGGCGG AGGAAGCACT GAACAACGAG
AACAATTACC CCGCAACCAA AAGAGACGAA CACGGCGTTC TGCAACCCCA GGCCGCCATG
GTGGTGCTTG ACCCGACCAA CGGTTATATC AAGGCCATCG TCGGCGGACG GGAGCACACC
CAGTTGCGGC AGTGGAACCG CGCCACCCGT ACCCAGCCTC AGCCCGGATC GGCCTTCAAG
CCGATTATCG CCTACGGTCC GGCCATAGAA TATCTGGGCA TGTCGCCGGC CTCCGTACTG
GATGATATCC CGATCAAATA TCCCAACTGG ACCCCCAGGA ACTACGACGG CGGCTACCGG
GGTCTGGTCA CCATGCGCAC GGCCCTGGCC TATTCGGTGA ACATCCCGGC GGTGAAGACT
CTGGAAGCGG TCACGCCGTC CCGCGCAGTG GACTTCGCCA GAAAACTCGG CATTACCACC
CTGGAACCCG ACCGGCACAA CCTGGCAATC GCTTTGGGCG GGCTGACCAA CGGGGTCACG
CCGCTGCAAA TGGCCGGCGC TTACGGCGCC TTTGCCAATC AGGGAGTGTA CATTGAACCC
ACCGCGATCA CCCGGGTCGA AGATATCCGG GGCCGACTCC TGGAGGAACA CATCCCGGTA
AAGACTCAGG CCATGAAGCC GACCACCGCC TACCTGATTA CCGACATGCT ACGTACCGCC
GTCACCAGCG GCACCGGGCG GAACGCGCGG CTCGCCGACC GGCCGGTGGC CGGCAAGACC
GGAACGACCG ACCATGAAAC CAGTATCTGG TTCTGCGGCT ATACTCCCAA TCTGGTCGGG
GTGGTGTGGA TGGGTCATGA CAACCATAAG GACCGCCTGC CACGCGGTTC GGTCGGCGGC
GGTCACCCGG CCGCGATCTG GCGCCAGGTG ATGGGCAAAG CGCTCGCGGG CACACCGGTC
CGGGATTTCC CGCAGCCGCC CGGGATCGTT ACCGCCACGG TGGACAGCAA ATCGGGCCTG
CTGCCCGGCC CGCTCACCCC GCCGGACCAC CAGGTAACCG ATATCTTTGA ACGCGGGACC
GTGCCCACCG AGTACGACGA CGTCCACGTC CTGGTTGAAA TCTGCCCCTC CACCGGCTTG
CTGGCCGGGC AGTACTGTCC GGACCGCATC ACCAGGGTGA TGGTCGATGT CGGCTATGAC
GTGCCCGAGA TAGTCAAGGA CTACAACATC CGGGTGCCCA GAAAGACGTG CGCTTTGCAC
GACCGAGAAA CCGTTTTCAA CCCGCCGCTG GACTTCTGGC CGCCCAACGG CGGTCAGCAA
CCTGAAACCC CGGTGCCGAC GATGATGAAC TACGCCCGAC CGCAATGTTT CTTCGGAAGC
AACCGCGGCA GACACTGA
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| Protein sequence | MPRKKQRERR LNWFRLLIVL VAAGMLLGGL AAFGLVVVSL KDLPTWDPAA LQPNNATLIY
DVHGNLVTEI GLENRIPVDI GDIPPHVKKA FLAAEDVRFY QHYGVDPRAI ARAVWANVTG
SFGEQGGSTI TQQLVKNCFL SFDKTLKRKI QEAFLAIQVE RHYAKDEILQ MYLNWVYFGE
GAYGIEAAAR TYFGKSVSEL DLSEAATLAG LLKGPSIYSP YRDLQAATNR RNTILDLMWR
YEFVGRAEAE EAKAKPIELG KPVAADNPGP SYPYPHFVDH VTDVLVDKYG EARVFKEGLR
VYTTLDPKIQ RAAEEALNNE NNYPATKRDE HGVLQPQAAM VVLDPTNGYI KAIVGGREHT
QLRQWNRATR TQPQPGSAFK PIIAYGPAIE YLGMSPASVL DDIPIKYPNW TPRNYDGGYR
GLVTMRTALA YSVNIPAVKT LEAVTPSRAV DFARKLGITT LEPDRHNLAI ALGGLTNGVT
PLQMAGAYGA FANQGVYIEP TAITRVEDIR GRLLEEHIPV KTQAMKPTTA YLITDMLRTA
VTSGTGRNAR LADRPVAGKT GTTDHETSIW FCGYTPNLVG VVWMGHDNHK DRLPRGSVGG
GHPAAIWRQV MGKALAGTPV RDFPQPPGIV TATVDSKSGL LPGPLTPPDH QVTDIFERGT
VPTEYDDVHV LVEICPSTGL LAGQYCPDRI TRVMVDVGYD VPEIVKDYNI RVPRKTCALH
DRETVFNPPL DFWPPNGGQQ PETPVPTMMN YARPQCFFGS NRGRH
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