Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1355 |
Symbol | secF |
ID | 6026680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1429631 |
End bp | 1430512 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641594170 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001717496 |
Protein GI | 169831514 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTCACT TCGTAAGGCA ACGCAAGTAC TGGTACCTGA TTTCGCTGCT GATCATCGTC CCGGGGATCA TCTCCCTGCT GTTCCGGGGT TTGAACCTGG GGATCGACTT CACGGGCGGC AGCCTGGTAG AGGTTCAATT CCAGAAGCAG GTGAGCGTCC AGGAGGTGCG CGCGGTGCTG ACCGGGCACG GCCTGGAACG GAGCGTCATC CAGCTCAGCG GGGACCGACA GGTGCTTATC CGCACCGGTG TCATCACCGA GACCCAGAAC CAGGCGATGA TCGAATCCCT GGGTAAGGAG GTCGGGACCC TGACCGTGCT CCGGAACGAG GCGGTCGGCC CGGTGATCGG TAAGGAACTG GCGCAGAGAG CGATCCTGGC GCTGTTGGCG GCCGCCGTTG CCATTGTGGT CTACATTTCC TGGCGCTTTG AATTCAAACA GGGTCTTGCC GCTATTGTGG CGCTTCTGCA CGACGCCCTG ATCACGATCG GCATATTCTC GCTATTCTGG ATCCAGGTGG ACAGCGCCTT TGTGGCGGCG GTCCTGACCA TTCTCGGTTA CTCCATCAAC GCCACCATCG TGATCTTTGA CCGGATCCGT GAAAACGCCA AGGCCGCCAA GAAGACCGAG CCCCTGGAGG ACGTCGTCAA CCGGAGCCTG TGGGACACCA TGGCGCGTTC GATCAACACC TCGGTGACCG TGATGTTCAT GCTGCTCGCG CTGTTCTTCC TGGGCGGCGC GACGCTGAAA GCGTTTGTCC TGGCCCTGAT GATCGGTGTG GTAAGCGGTA CCTGGTCCTC GATTTTCATT GCCGGCCCGG TATGGCTGGA CTTAAGGAAG CGGCTGCCGC GGTCAAAAAG ACCGGCGGGC GCCCGGGCCT GA
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Protein sequence | MFHFVRQRKY WYLISLLIIV PGIISLLFRG LNLGIDFTGG SLVEVQFQKQ VSVQEVRAVL TGHGLERSVI QLSGDRQVLI RTGVITETQN QAMIESLGKE VGTLTVLRNE AVGPVIGKEL AQRAILALLA AAVAIVVYIS WRFEFKQGLA AIVALLHDAL ITIGIFSLFW IQVDSAFVAA VLTILGYSIN ATIVIFDRIR ENAKAAKKTE PLEDVVNRSL WDTMARSINT SVTVMFMLLA LFFLGGATLK AFVLALMIGV VSGTWSSIFI AGPVWLDLRK RLPRSKRPAG ARA
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