| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1276 |
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| Symbol | |
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| ID | 6027642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1339323 |
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| End bp | 1343015 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641594093 |
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| Product | UvrD-like DNA helicase, C terminal |
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| Protein accession | YP_001717419 |
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| Protein GI | 169831437 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCA GAAACTGGAC CGGGCCCCAA GAAGCGGCCA TCGGCTGCCG GGAGAAGAAC
CTCCTGGTCG CGGCCGGTGC CGGCTCGGGG AAGACGGCGG TGCTCGTGGA AAGGGTGATC
CGCCGCATTT CCGACCCGGC CGCGCCGGTG GACGTCGACC GGCTCCTGGT GGTCACCTTC
ACGAACGCCG CCGCGGCGGA GATGCGCAAG CGGGTGGCCG AGGCGCTGGA GCGCGAGCTG
GAGAAACACC CCGGCATGCC GTTGCTGGAG CACCAGCTGC GGCTTCTGCC CCAGGCGGAC
ATCACTACGA TTCACTCCTT CTGCGCGGAA CTACTCCGCC GGTACCACTA CCTCATCGAC
CTGGACCCGG AGTTCCGGGT GGCCGACGAG ACCGAAGCCG CGATCTTGCG CCAGGAAACC
CTGGAGGAGT TCTTTGAAGA GCAGTACCGG GTGATCACCG GCGACCCCGA CCTGGAGTTC
CTGGTCGAGG CGTACGGGGG TGAACGGGAC GACCTGAAAC TACAGAACCT GGTGTCGGGT
CTGCACCGGT TTGCCCGGAG CAATCCCTGG CCCGAGGCTT GGCTCGCGCG GGCCGCCGCC
TTTGGCGCGG ACCCGCAGGG TCTGGACGGG GACGGTCCGC TGGCGTGGGG CTTGAGGGAC
CTGGTGGGGA CGGGGCTCGA GGCCGCCGTG TTTGAACTGC GGGCCGCCCT GGAAGCGGCA
AAAGCGCCGG GCGGGCCAGC GGTCTACGCA GACGCGCTCG CCGCGGAGGT TGAAGGGACG
GCGCGGCTCG CGGGCCTGGT GGCCGGTGAT TGGGAGCCAT TGCGGGCCGC CTTCCTGGCC
TTTGGGTTCA CGCCCCGGCT GCCGGCGGCC CGCGCCGGCG TGGATCAGGA ACTAAAGGAT
CTGTGTTCCC GCTGCCGGAA GAAAGCCAAG GAGCGTATCC AGAACCTGAA GGAGACCTTT
TTCGCCCGCC GCCCCGAGGA ACTCTTAAGC GAGATGGCGG CCCTCGGCCC GGCGATGCGC
CGGCTCGCAG CGCTGGCGGC CGATTTCGGG GAGGCCTACC GGACGGCCAA GCTAGCGCGC
AACCTGGTGG ACTTCGCCGA CCTTGAACAC TACTGCCTGC AGATCCTGCT GGCCCCGGGC
TCCACCCCGG AGGCGCCCGT GCCCTCGCCG GTGGCGGCCG GACTCCGGGA ATACTACGTC
GAGGTGCTGG TCGACGAGTA CCAGGACATC AACGCCGTTC AGGAGACCAT CCTGCGCCTG
GTGTCCAGGC AGGATGCCGC CGCGCCCAAC CTGTTCATGG TGGGGGACGT GAAACAGAGC
ATTTACCGGT TCCGGCTGGC CGAACCGGCA CTCTTTTTGG AAAAGTACCG CGCGTTTGAC
ACGGGGGAGG ACGCCGGCGG AGCCCGGCGC ATCGACCTGA GTCACAACTT TCGGAGCCGG
GAATCGATCA TCCACGCGGT GAACGCGGTT TTCCGGCGGA TCATGACTCC GGCGGTCGGA
GAACTGGCCT ATGACACGGC TGCGGAACTG GTATGCGGCG GCACGCCGGC CCAGCTCGAG
GGGAGCGGCC CGCCCGTGGA GGTGCACCTG CTCGGGGCAC CCACGTCAGT GGGTCGGGAT
ACCGCCGGAA CGGCGGATGA CGAGCCGGAC CGGTCGGACG AGGCCGACCT GACCGCCGTC
CAGCGCGAGG CGCGGCTGGT CGCGGGGATC ATCCGGCGCC TGGCGGGCCT CGGCGGGGAG
TGCACGGTGC CCTACCGGGA TATCGTGGTG CTGATGCGCG CCACCACTGG GAAGGCGGGC
ACCTACCTGG AGGAATTCCG TCGGCAGAAC ATCCCGGCGT ACGCAAAGGT CGGCACGGGC
TACTTCGAGG CCGTGGAAGT GGAGACTGTG CTGTCCTTGC TGAAGGTGAT CGACAACCCG
CACCAGGACA TCCCGCTGGC CGGTGTGCTC CGCTCGCCCC TGGTGGGACT CGGCGCGGCG
GAACTGGCCG CCGTCCGCCT CGCGGACAAA GAGGGCGACT TCTTCCGGGC GGTGGTGGCG
GCGGCGGGGC AGGGCGGCCG CCTGGGCGCG GTCCTGGCGG GCTTCCTGGA GCGGCTGGAA
AAGTGGCGCT CGCAGGCGCG GTGCGGGTCT TTGGCGGACC TGATCTGGGA CGTGTACCGG
ACCACGGGTT ACTACGACTA TGTCGGCGGG CTGCCCGGAG GTGCCGGGCG GCAGGCCAAC
CTGCGGGCCC TATACGACCG GGCGCGCCAG TACGAAGCGA CCGCCTTCCG GGGGCTGTTC
CGGTTCCTGC GCTTCATTGA GCTGCTCCAG GAAGGGGGTC AGGACCTCGG GCCGGCCCCG
GCCCTGGCCG AGAGCGAGAA CGTGGTCCGG ATCATGAGCA TTCACCAGGC CAAGGGGCTG
GAGTTTCCGG TGGTGATCCT GGCCGACATG GGCCGGCGGT TCTACATGCC GGACCTGAAC
GGGGAGGTGC TGCTGCACAA GGACCTCGGG CTCGGGCCAT ACTTCGTGGA CCCGGGGGCC
CGGGTCAGCC ACCCCACCGC GGCGTGGCAC GTCGTCCGGG AGAGGCTGCG CCGGGAGCAA
CTGGCGGAGG AAATGCGCAT CCTGTACGTG GCGATGACCA GGGCCCGCGA GCGGCTGATC
CTGACCGGCT CGGCGGGCCG GCTGGAGCAG GCCGTGCTCC GTTGGAGCCA CGCGGCCGCC
GGTGACGGGG AGACCCTGCC CGTGCCCGTG CTCGCGGAGG CCGAGAGTTT CCTGGACTGG
GTGATGCCGG TTCTGATGGC GCACCCGGAC GGCGAACCGC TGCGCCGCCT TGCCGTTCGC
TCCCGCCCGG CGGCCGGAAC GCCTAAAGAC CGGTCCCGGT GGGAGGTGCA CCTGCACCGG
CCGGAGGACC TGGAAGAGGC GGCGGGGGCG GACCCGGACA CGGCGGCCGT GCTCGAGAGC
CTGCGCCGGC TGGCGCCGAT ACCCGCGGAC GGCGGCCTGG ACGAGGCGGT TCACCGGGCG
CTGTCCTGGC ACTATCCCTG GTCCGCCCTT GCCTCTTGCG GCGCAAAGAT CTCGGCCACC
GAGGTCAAGC GCCGTTTTGC GGCGGCCGCC GCCGGAGAGG AGGAAGTGCC TGCCGTTTTC
CCGTACCGTG CGCCGCCCGC CCGCCCGGCA TTCCTGGAAA CCGCCCGGGG ACTCTCGCCG
CAGGCGTTCG GCCGGGCCAT GCACGTGGTG CTCCAGCACC TGGACCTCGC CGGGGACTTG
AGCGTGGACG GCATCCGCGC GCAGGTGGCC GGGCTGGAGG AAAGGGAGTT CTTGACGGCG
ACGGAGGCCC GGGCGATTGA CGCTGAAAAG CTGGCCGGGC TGTTCGCGGG CGGCCTGGGG
CGGCGCCTCG CCGGGGCGTT GTGGGTGCGC CGGGAGTGGC CGTTTTGCCT GGTCGTCCCG
GCCCACGAGA TTTACCCCGG GCTGGAGGGC CATCCGGAGG AGCGGGTGAT GGTCCAGGGA
ATCATCGACT GCCTTTTCGC CGAACCGGAC GGCCTGGTTC TGGTGGACTA CAAGACCGAC
CGAGTGGGGC CGGGCGGCGA GGCCGCGCTG GCGGACCGGT ACCGCGGGCA GTTGGATCTT
TATGCCCGGG CCGTGGAGGC GGTCCTGAGA CGGCGGGTTA AGGAGCGTTA CCTTTTCCTG
GTAATGACGG GTTCGGCCCA GATTATCCAG TAA
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| Protein sequence | MSSRNWTGPQ EAAIGCREKN LLVAAGAGSG KTAVLVERVI RRISDPAAPV DVDRLLVVTF
TNAAAAEMRK RVAEALEREL EKHPGMPLLE HQLRLLPQAD ITTIHSFCAE LLRRYHYLID
LDPEFRVADE TEAAILRQET LEEFFEEQYR VITGDPDLEF LVEAYGGERD DLKLQNLVSG
LHRFARSNPW PEAWLARAAA FGADPQGLDG DGPLAWGLRD LVGTGLEAAV FELRAALEAA
KAPGGPAVYA DALAAEVEGT ARLAGLVAGD WEPLRAAFLA FGFTPRLPAA RAGVDQELKD
LCSRCRKKAK ERIQNLKETF FARRPEELLS EMAALGPAMR RLAALAADFG EAYRTAKLAR
NLVDFADLEH YCLQILLAPG STPEAPVPSP VAAGLREYYV EVLVDEYQDI NAVQETILRL
VSRQDAAAPN LFMVGDVKQS IYRFRLAEPA LFLEKYRAFD TGEDAGGARR IDLSHNFRSR
ESIIHAVNAV FRRIMTPAVG ELAYDTAAEL VCGGTPAQLE GSGPPVEVHL LGAPTSVGRD
TAGTADDEPD RSDEADLTAV QREARLVAGI IRRLAGLGGE CTVPYRDIVV LMRATTGKAG
TYLEEFRRQN IPAYAKVGTG YFEAVEVETV LSLLKVIDNP HQDIPLAGVL RSPLVGLGAA
ELAAVRLADK EGDFFRAVVA AAGQGGRLGA VLAGFLERLE KWRSQARCGS LADLIWDVYR
TTGYYDYVGG LPGGAGRQAN LRALYDRARQ YEATAFRGLF RFLRFIELLQ EGGQDLGPAP
ALAESENVVR IMSIHQAKGL EFPVVILADM GRRFYMPDLN GEVLLHKDLG LGPYFVDPGA
RVSHPTAAWH VVRERLRREQ LAEEMRILYV AMTRARERLI LTGSAGRLEQ AVLRWSHAAA
GDGETLPVPV LAEAESFLDW VMPVLMAHPD GEPLRRLAVR SRPAAGTPKD RSRWEVHLHR
PEDLEEAAGA DPDTAAVLES LRRLAPIPAD GGLDEAVHRA LSWHYPWSAL ASCGAKISAT
EVKRRFAAAA AGEEEVPAVF PYRAPPARPA FLETARGLSP QAFGRAMHVV LQHLDLAGDL
SVDGIRAQVA GLEEREFLTA TEARAIDAEK LAGLFAGGLG RRLAGALWVR REWPFCLVVP
AHEIYPGLEG HPEERVMVQG IIDCLFAEPD GLVLVDYKTD RVGPGGEAAL ADRYRGQLDL
YARAVEAVLR RRVKERYLFL VMTGSAQIIQ
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