Gene Daud_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1256 
Symbol 
ID6026447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1316250 
End bp1317284 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content61% 
IMG OID641594073 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_001717399 
Protein GI169831417 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGAAAA AGAGGAGAAT TCTAGCCTGG ATAGTGACCG TAGTGTTCGT GCTGGGGCTG 
GCTGTGGCGG CCGGCTGCGG CGGTGGGAAG GCGCCGGCAC CCGCACCCCA AGAGGAGAAG 
AAGCCGTGGC CGACTTCCAT GACCATCGGC GCCGCATCCA TCGGCGGCAC TTATTACCTG 
TATGCCGGCG GCTGGAGCCA AGTCATTGAG AAAGTCACGG GGATTCCCAC CGCCGTGGAG 
GTGACCGGTG GTCCGAACCA CAATATGCAG TTAGTGCATA ACGGTGACCT GGAACTGGGT 
ATGGTGACCA TGGGTCCAGC CTTCGAAGGC TGGAACGGTG AAGGCGACTG GACGCAAGGG 
GTCAAGATGA CCAACGTACG GGCGATTTTC CCGATGTACA CCACTTACTC CCAGTGGTGG 
GCCTTCAAGG ATTCTGGCAT CAGATCCATC ACCGACCTGG CGGGCAAGAG AGTCGGCGTC 
GGCCCAGCCG GCGGCACGGC CGGAACCTAC CATCCGCGCA TCCTGGAGTT GCTGGGAATT 
AACGCCACCG TGCGGCACGC CGGTATCGGC GACCTGGTGG CCCAGCACCA GGACGGGCAG 
TTGGACGCGA ACAGCTTTGC GGCTGGCATT CCGGTTTCGA GCGTGATGGA GGCGGCGGCG 
CAGAAGGAAT TGGTTCTCTT CGGGGTGGAC GGCGAGGCCC GGGATAAGGT CTGCGCCGAG 
TGGCCCTTCT GGAGCCCGTC GGTCATTCCG GCCGGTGCGT ACGACTTCCT GACCGAAGAC 
GTGCAGACGA TCGAAATGTG GAACATGGCC ATCGCCCACA AAGACCTGCC AGATGATCTG 
GTTTATGAGA TCGTCAAGGG TGTATTCGAG AACCGGGAGA TGATGATCAC GGCGCACCCG 
GCCGCCAAGG AGACGCTGGC GGAGAACGTG GTCAAGAACA CCTGGTTGCC GATGCATCCT 
GGAGCCATCA AGTACTACGA GGAAATCGGC ATCGAACTGC CGGCGGAAGT CTACCCGGCG 
GAGTATAAGA AGTAA
 
Protein sequence
MLKKRRILAW IVTVVFVLGL AVAAGCGGGK APAPAPQEEK KPWPTSMTIG AASIGGTYYL 
YAGGWSQVIE KVTGIPTAVE VTGGPNHNMQ LVHNGDLELG MVTMGPAFEG WNGEGDWTQG 
VKMTNVRAIF PMYTTYSQWW AFKDSGIRSI TDLAGKRVGV GPAGGTAGTY HPRILELLGI 
NATVRHAGIG DLVAQHQDGQ LDANSFAAGI PVSSVMEAAA QKELVLFGVD GEARDKVCAE 
WPFWSPSVIP AGAYDFLTED VQTIEMWNMA IAHKDLPDDL VYEIVKGVFE NREMMITAHP 
AAKETLAENV VKNTWLPMHP GAIKYYEEIG IELPAEVYPA EYKK