Gene Daud_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1239 
Symbol 
ID6026693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1298501 
End bp1299232 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID641594055 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_001717382 
Protein GI169831400 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCACCT GGTGCGGTTG GCCCAGGAAA GATAATTCAG AACAGGAGGA GAGCGATATC 
GACAGATTAA AGCTCGCTCA GGCCATTGAC CATACCCTGC TGAGGGCCGA CGGCACCCAG
GACGAGGTGC GCAACCTCTG CCGCGAAGCG CGGGAGTTCG GTTTCGGTGC GGTGTGCGTG
AATCCGTGTT TTGTATCCCT GGCCGCCCGG GAACTAGACG GAACCGGGGT CAAGGTCTGC
ACCGTGATCG GGTTTCCCCT CGGCGCGAAC GCTGTCGAAA CCAAGGTGAC TGAAGCCCGC
CTGGCGGCCA CCGACGGCGC CCACGAGATC GACATCGTAT TGAACATTGG GGCCCTGAAG
GAGGGTGACT CCAAATACCT GATGTCCGAA GCCGACAAGG TCATCGAGGG TGCCCGGGAC
GTGAACCGGG ATATCCTGGT CAAACTCATC GCGGAAACCG GGTTTCTGAC CGCGGACGAG
AAGCTGCTGG CCTGTTGGGT GGCCACCGGG TCGGGTGCGG ACTACATCAA GAACGCCACC
GGCTACGGGC CCACGGGAGC CCAACCGGAT GAAATCAGGT TTCTGAGAAA AGCCGTCGGT
TCCCATTTCG GCGTTAAGGC CGCCGGGGGA ATCCGGGACC TGAAAACGGC GCTGGCCCTT
CTGGAGGCCG GGGCCGACCG CCTGGGGACA AGTTCCGGTA TACGGATAAT ACGGGAGTGG
CCGGCCGAAT AA
 
Protein sequence
MSTWCGWPRK DNSEQEESDI DRLKLAQAID HTLLRADGTQ DEVRNLCREA REFGFGAVCV 
NPCFVSLAAR ELDGTGVKVC TVIGFPLGAN AVETKVTEAR LAATDGAHEI DIVLNIGALK
EGDSKYLMSE ADKVIEGARD VNRDILVKLI AETGFLTADE KLLACWVATG SGADYIKNAT
GYGPTGAQPD EIRFLRKAVG SHFGVKAAGG IRDLKTALAL LEAGADRLGT SSGIRIIREW
PAE