Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1239 |
Symbol | |
ID | 6026693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1298501 |
End bp | 1299232 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641594055 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_001717382 |
Protein GI | 169831400 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCACCT GGTGCGGTTG GCCCAGGAAA GATAATTCAG AACAGGAGGA GAGCGATATC GACAGATTAA AGCTCGCTCA GGCCATTGAC CATACCCTGC TGAGGGCCGA CGGCACCCAG GACGAGGTGC GCAACCTCTG CCGCGAAGCG CGGGAGTTCG GTTTCGGTGC GGTGTGCGTG AATCCGTGTT TTGTATCCCT GGCCGCCCGG GAACTAGACG GAACCGGGGT CAAGGTCTGC ACCGTGATCG GGTTTCCCCT CGGCGCGAAC GCTGTCGAAA CCAAGGTGAC TGAAGCCCGC CTGGCGGCCA CCGACGGCGC CCACGAGATC GACATCGTAT TGAACATTGG GGCCCTGAAG GAGGGTGACT CCAAATACCT GATGTCCGAA GCCGACAAGG TCATCGAGGG TGCCCGGGAC GTGAACCGGG ATATCCTGGT CAAACTCATC GCGGAAACCG GGTTTCTGAC CGCGGACGAG AAGCTGCTGG CCTGTTGGGT GGCCACCGGG TCGGGTGCGG ACTACATCAA GAACGCCACC GGCTACGGGC CCACGGGAGC CCAACCGGAT GAAATCAGGT TTCTGAGAAA AGCCGTCGGT TCCCATTTCG GCGTTAAGGC CGCCGGGGGA ATCCGGGACC TGAAAACGGC GCTGGCCCTT CTGGAGGCCG GGGCCGACCG CCTGGGGACA AGTTCCGGTA TACGGATAAT ACGGGAGTGG CCGGCCGAAT AA
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Protein sequence | MSTWCGWPRK DNSEQEESDI DRLKLAQAID HTLLRADGTQ DEVRNLCREA REFGFGAVCV NPCFVSLAAR ELDGTGVKVC TVIGFPLGAN AVETKVTEAR LAATDGAHEI DIVLNIGALK EGDSKYLMSE ADKVIEGARD VNRDILVKLI AETGFLTADE KLLACWVATG SGADYIKNAT GYGPTGAQPD EIRFLRKAVG SHFGVKAAGG IRDLKTALAL LEAGADRLGT SSGIRIIREW PAE
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