Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1230 |
Symbol | |
ID | 6025441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 1291594 |
End bp | 1293162 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641594046 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001717373 |
Protein GI | 169831391 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0449934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAA AGCAGTCGGT GGCCCAGGGG ACGCTGGTCC TTACCGCTTC CAGCCTTTTC AACCGCATAC TCGGATTCGT CTACCAGGTC CTGATGGTCC GCCTGCTGAA GGCTGAAGGC ATCGGGCTTT TCAGCATGAT CTATCCGGTG TACGTCCTGT TTCTGGTGGT AGCCAGCGCG GGGATACCGG TGGCCATCGC CAAGGTGGTG GCCGAGGAGT CCGCCCGCGG CAACCTCGCG AACGCCTACC GGATCTTCCG GATCTCCCTG GGCTTCGTCT TCGGTTCCGC GCTGGTGTTG ACGGTTGCCC TGTTGCACTA CGGCACGCCG CTGTTGATAA TGGTGTTCGA CAATCCTGAT GTCCACCTGG CCTTCAAGGT GCTCACCCCC GGGATACTGG TCGTTTCGGT GTGTTCAGCT TTCCGGGGTT TCTTCCAGGG ATTGCAACAG ATGACACCTA CGGCGGTGAC CCAGGCGGTG GAGCAGTCGG TGCGCGTGGT CTGCGGTCTG GTGCTGGCGT ACCTGCTGAT GCCCCGGGGC ATCGCCTGGG CCACGGCCGG GGCCTCCGCC GGGGTGGTCC TGGGAGAGTT GTCCGGTTTT TTGCTCATGC TGCTGATCTT CTTCACCCGG AGGCCGGCGG TGGGCGGCGG AGCCGGGGTG CCGGCGTTCA CCGAATCCCT GGGGGTCATC TCCCGCCGCA TCTTCAGTCT GGCCGGGCCG GTTACCGTTT CCCGGGTGTT GTCCACCGCC CTTTTGTCGG TCGACGCGGT GATGATTCCC AAGCGCCTCG CCGCGGCCGG CCTGTCCACC GCCGAGGCCA CCGCCAGTTA CGGCAAACTG GCCGGGATGG CCCAGACCCT GCTGTTCACG CCCGGAATCT TCACGATCTC CCTGGCCACC GCCCTTCTGC CCGCCATCTC CAGCGCCCAC GCCCGGGGGG ACACCGCCCT GCTGCTCAAC CGGGTCGGTT CGGCCCTCCG TCTCACCCTG CTGATCGGCA TCCCCAGCGC CGTGATCTTT CTGACCCTTT CCAGACACAT TTGTGGCTTG CTCTTCGGCT ATCCTGACGC GGGGGCGATC CTCCAGGTTC TGGCTCTCGG GGGACCGTTT CTGTACATCA TCCAGACCAC CACGGGTATC CTGCAGGGAT TAGGCAAGGC GGTGCAACCC CTGGTCAACC TGCTGATCGC CTCGCTGCTC AAAATCGCGG GTGTCTACTA CTTGACGGCG GTGCCGGGCC TGGCGATGAA CGGCGTCGCC CTGGCCTTGG TCGCCCACCT CATGGTTATG GCGCTCTTAA ACCTCCGGGA CATCCGCCGG TTAACCGGTT ACCGTCTGGA TTACCTGAAC AGCTTGGGGA AAACCTCGCT CGGCGCTCTT GCCATGGTCG CGGTGATCCA ATGGGTCAAC CCGGCGCCGG ACAGTGTCTC CGGCACTTTG CAGGCCGGCC TGGGCGGGCT GGCGGCGTAC CTGGGGGTGG TGGTTTCAAC CGGTGCGCTG GCGCGCGAGG AGCGGACGCG CCTGGACAGC CTTGTGCGCG ACCTTCTGGG ACGCGGGCGT GGCAGGTGA
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Protein sequence | MPEKQSVAQG TLVLTASSLF NRILGFVYQV LMVRLLKAEG IGLFSMIYPV YVLFLVVASA GIPVAIAKVV AEESARGNLA NAYRIFRISL GFVFGSALVL TVALLHYGTP LLIMVFDNPD VHLAFKVLTP GILVVSVCSA FRGFFQGLQQ MTPTAVTQAV EQSVRVVCGL VLAYLLMPRG IAWATAGASA GVVLGELSGF LLMLLIFFTR RPAVGGGAGV PAFTESLGVI SRRIFSLAGP VTVSRVLSTA LLSVDAVMIP KRLAAAGLST AEATASYGKL AGMAQTLLFT PGIFTISLAT ALLPAISSAH ARGDTALLLN RVGSALRLTL LIGIPSAVIF LTLSRHICGL LFGYPDAGAI LQVLALGGPF LYIIQTTTGI LQGLGKAVQP LVNLLIASLL KIAGVYYLTA VPGLAMNGVA LALVAHLMVM ALLNLRDIRR LTGYRLDYLN SLGKTSLGAL AMVAVIQWVN PAPDSVSGTL QAGLGGLAAY LGVVVSTGAL AREERTRLDS LVRDLLGRGR GR
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