Gene Daud_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1230 
Symbol 
ID6025441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1291594 
End bp1293162 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content65% 
IMG OID641594046 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_001717373 
Protein GI169831391 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID[TIGR02900] stage V sporulation protein B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0449934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA AGCAGTCGGT GGCCCAGGGG ACGCTGGTCC TTACCGCTTC CAGCCTTTTC 
AACCGCATAC TCGGATTCGT CTACCAGGTC CTGATGGTCC GCCTGCTGAA GGCTGAAGGC
ATCGGGCTTT TCAGCATGAT CTATCCGGTG TACGTCCTGT TTCTGGTGGT AGCCAGCGCG
GGGATACCGG TGGCCATCGC CAAGGTGGTG GCCGAGGAGT CCGCCCGCGG CAACCTCGCG
AACGCCTACC GGATCTTCCG GATCTCCCTG GGCTTCGTCT TCGGTTCCGC GCTGGTGTTG
ACGGTTGCCC TGTTGCACTA CGGCACGCCG CTGTTGATAA TGGTGTTCGA CAATCCTGAT
GTCCACCTGG CCTTCAAGGT GCTCACCCCC GGGATACTGG TCGTTTCGGT GTGTTCAGCT
TTCCGGGGTT TCTTCCAGGG ATTGCAACAG ATGACACCTA CGGCGGTGAC CCAGGCGGTG
GAGCAGTCGG TGCGCGTGGT CTGCGGTCTG GTGCTGGCGT ACCTGCTGAT GCCCCGGGGC
ATCGCCTGGG CCACGGCCGG GGCCTCCGCC GGGGTGGTCC TGGGAGAGTT GTCCGGTTTT
TTGCTCATGC TGCTGATCTT CTTCACCCGG AGGCCGGCGG TGGGCGGCGG AGCCGGGGTG
CCGGCGTTCA CCGAATCCCT GGGGGTCATC TCCCGCCGCA TCTTCAGTCT GGCCGGGCCG
GTTACCGTTT CCCGGGTGTT GTCCACCGCC CTTTTGTCGG TCGACGCGGT GATGATTCCC
AAGCGCCTCG CCGCGGCCGG CCTGTCCACC GCCGAGGCCA CCGCCAGTTA CGGCAAACTG
GCCGGGATGG CCCAGACCCT GCTGTTCACG CCCGGAATCT TCACGATCTC CCTGGCCACC
GCCCTTCTGC CCGCCATCTC CAGCGCCCAC GCCCGGGGGG ACACCGCCCT GCTGCTCAAC
CGGGTCGGTT CGGCCCTCCG TCTCACCCTG CTGATCGGCA TCCCCAGCGC CGTGATCTTT
CTGACCCTTT CCAGACACAT TTGTGGCTTG CTCTTCGGCT ATCCTGACGC GGGGGCGATC
CTCCAGGTTC TGGCTCTCGG GGGACCGTTT CTGTACATCA TCCAGACCAC CACGGGTATC
CTGCAGGGAT TAGGCAAGGC GGTGCAACCC CTGGTCAACC TGCTGATCGC CTCGCTGCTC
AAAATCGCGG GTGTCTACTA CTTGACGGCG GTGCCGGGCC TGGCGATGAA CGGCGTCGCC
CTGGCCTTGG TCGCCCACCT CATGGTTATG GCGCTCTTAA ACCTCCGGGA CATCCGCCGG
TTAACCGGTT ACCGTCTGGA TTACCTGAAC AGCTTGGGGA AAACCTCGCT CGGCGCTCTT
GCCATGGTCG CGGTGATCCA ATGGGTCAAC CCGGCGCCGG ACAGTGTCTC CGGCACTTTG
CAGGCCGGCC TGGGCGGGCT GGCGGCGTAC CTGGGGGTGG TGGTTTCAAC CGGTGCGCTG
GCGCGCGAGG AGCGGACGCG CCTGGACAGC CTTGTGCGCG ACCTTCTGGG ACGCGGGCGT
GGCAGGTGA
 
Protein sequence
MPEKQSVAQG TLVLTASSLF NRILGFVYQV LMVRLLKAEG IGLFSMIYPV YVLFLVVASA 
GIPVAIAKVV AEESARGNLA NAYRIFRISL GFVFGSALVL TVALLHYGTP LLIMVFDNPD
VHLAFKVLTP GILVVSVCSA FRGFFQGLQQ MTPTAVTQAV EQSVRVVCGL VLAYLLMPRG
IAWATAGASA GVVLGELSGF LLMLLIFFTR RPAVGGGAGV PAFTESLGVI SRRIFSLAGP
VTVSRVLSTA LLSVDAVMIP KRLAAAGLST AEATASYGKL AGMAQTLLFT PGIFTISLAT
ALLPAISSAH ARGDTALLLN RVGSALRLTL LIGIPSAVIF LTLSRHICGL LFGYPDAGAI
LQVLALGGPF LYIIQTTTGI LQGLGKAVQP LVNLLIASLL KIAGVYYLTA VPGLAMNGVA
LALVAHLMVM ALLNLRDIRR LTGYRLDYLN SLGKTSLGAL AMVAVIQWVN PAPDSVSGTL
QAGLGGLAAY LGVVVSTGAL AREERTRLDS LVRDLLGRGR GR