Gene Daud_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1216 
Symbol 
ID6026453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1275724 
End bp1277160 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content59% 
IMG OID641594031 
Productcopper amine oxidase domain-containing protein 
Protein accessionYP_001717359 
Protein GI169831377 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.73824e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAGA GTAAGAAAGT AGTGCATTTC TGGTTACTAA CGGCATTTCT CTTGGCCTTA 
CTGGGTGGAA AGGGCATTCT TCCGGCGGAG GCGGCGATCA CCATAACAAT TGACGGCGAG
AGGCTTTCCG GCGATACGCC GCCGGTGATT GAAGGGGGCT ACACGCTCGT ACCGCTCCGG
ACGATCTTCG AGGCGCTCGG GGCAGAAGTG CACTGGGACG AGAAGACCCG TACCGTCACG
GGTAGTAAGG GAACCGCTAC CGTCAAACTG GTCATAGGGG AGAAAACGGC TTACGTCAGC
GGTAAGCCCG TGACTCTCGA TGTGGCGGGC AAGATGATCA ATGGCCGGAC GATGGTGCCC
CTGCGCTTTA TCGGCGAAGC GCTCGGCGCC AAGGTCGATT GGAACGGCGC GCAACGCATG
GTGGTCATCC GCACCGACAG GGGCAGTGCT CCGGCGGTGA TCCGCACCGA TGAGGGCAGT
GCTCCGGCGG CACAGAGGCG GATCACCATC AAAGATTCCC ACGGCCGGAC GGTGCGCGTT
CCATCGCCTC CGAAACGGAT CGTCTCAGTC AACTCGGACG TCACCGAGCT TATCTACGCT
CTTGGCTTGC AGGACAGAAT TGTCGGCGTT TCGGATACGG CGGACTTTCC ACCTCCGGTC
AAAGACAAGC CGAAGGTGGG CAGATCTTTC ACCCCGAGCG TCGAGAGAAT CCTAGCCCTC
AAGCCCGACG TGGTCTTCGG CTACGGCAAG TTTTTGAAGC CCGAGATCGT GGCGCAGCTT
GAGCGTTCCG GCGTGCCGGT GGTGCTGCTG GACTGTTACA AAATCGAAAC GATGGCACAG
GACATCCGGA CCCTGGGGCT GATCCTCAAC CGGCAGAAGA AGGCCGAAGC CTACGTCGCC
TACTTCGAAA AGTACCGGAA AATGTTTGAG GAGCGGACCA AGAACATCCC GCTCGCCAAG
CGGCCGCGGG TCTACTTGGA GCTGTATTCG GACTACGTGG GGAGCGGTCC GGGTTCCGGC
GGCGGCCAGA TGCTGGGCGC GGTAGGGGTG CAAAACATCG CGGAGGATTT ACGGGTACCC
TTTCCGAAGG TGAACCCGGA ATGGGTAGTG GCGCAGGACC CGCAGGTGAT CATTAAGGCT
TGTGGAACGG CCATTCCCTC AGGGTATGGC GAAGGAGCGG ACGCCATGGT GAAAAAGCGA
AGGGAGATGA TGCGGCGTCC GGGGTGGGAT AGAATCACCG CCGTGCGGCA GGGGAAGGTC
TACCTCCTAT CCAGCGAGAT TTACACCGGT CCGCGGGCGA TCGTCGGCAT GGCCTACTTC
GCCAAGTGGG TTTACCCGGA CGCTTTTAAG GATGTCAATC CGGAGGCCAT CCATCAGGAA
ATGCTACAGA AGTTCCACGG GATCGAGGTT AAGGGGGCTT ATGTTTATCC GGAATAA
 
Protein sequence
MLKSKKVVHF WLLTAFLLAL LGGKGILPAE AAITITIDGE RLSGDTPPVI EGGYTLVPLR 
TIFEALGAEV HWDEKTRTVT GSKGTATVKL VIGEKTAYVS GKPVTLDVAG KMINGRTMVP
LRFIGEALGA KVDWNGAQRM VVIRTDRGSA PAVIRTDEGS APAAQRRITI KDSHGRTVRV
PSPPKRIVSV NSDVTELIYA LGLQDRIVGV SDTADFPPPV KDKPKVGRSF TPSVERILAL
KPDVVFGYGK FLKPEIVAQL ERSGVPVVLL DCYKIETMAQ DIRTLGLILN RQKKAEAYVA
YFEKYRKMFE ERTKNIPLAK RPRVYLELYS DYVGSGPGSG GGQMLGAVGV QNIAEDLRVP
FPKVNPEWVV AQDPQVIIKA CGTAIPSGYG EGADAMVKKR REMMRRPGWD RITAVRQGKV
YLLSSEIYTG PRAIVGMAYF AKWVYPDAFK DVNPEAIHQE MLQKFHGIEV KGAYVYPE